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L2_047_362G1_scaffold_908

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_908_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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313..825
DNA (513bp) protein (171aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJW9_9FIRM
L2_047_362G1_scaffold_908_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1013..1624
DNA (612bp) protein (204aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K017_9FIRM
Holliday junction DNA helicase subunit RuvA
L2_047_362G1_scaffold_908_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1628..2683
DNA (1056bp) protein (352aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K016_9FIRM
Holliday junction DNA helicase, RuvB subunit
L2_047_362G1_scaffold_908_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2698..4053
DNA (1356bp) protein (452aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphoglucosamine mutase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K015_9FIRM
L2_047_362G1_scaffold_908_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4086..4961
DNA (876bp) protein (292aa)
Predicted SAM-dependent methyltransferases (EC:2.1.1.64 2.1.1.-)
Predicted SAM-dependent methyltransferases {ECO:0000313|EMBL:CBK99613.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBK99613.1};; EC=2.1.1.64 {ECO:0000313|EMBL:CBK99613.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Predicted SAM-dependent methyltransferases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K014_9FIRM
L2_047_362G1_scaffold_908_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5244..6083
DNA (840bp) protein (280aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ABC-type cobalt transport system, ATPase component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K013_9FIRM
ABC-type cobalt transport system, ATPase component
L2_047_362G1_scaffold_908_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6098..7018
DNA (921bp) protein (307aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ABC-type cobalt transport system, ATPase component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K012_9FIRM
ABC-type cobalt transport system, ATPase component
L2_047_362G1_scaffold_908_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7012..7827
DNA (816bp) protein (272aa)
ABC-type cobalt transport system, permease component CbiQ and related transporters n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K011_9FIRM
ABC-type cobalt transport system, permease component CbiQ and related transporters
ABC-type cobalt transport system, permease component CbiQ and related transporters {ECO:0000313|EMBL:CBK99610.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_908_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8043..8798
DNA (756bp) protein (252aa)
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:CBK99609.1};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
tRNA pseudouridine synthase A n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K010_9FIRM
L2_047_362G1_scaffold_908_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8875..10107
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K009_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99608.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_908_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10123..10818
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K008_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99607.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_908_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10843..13143
DNA (2301bp) protein (767aa)
ATPases with chaperone activity, ATP-binding subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K007_9FIRM
ATPases with chaperone activity, ATP-binding subunit
ATPases with chaperone activity, ATP-binding subunit {ECO:0000313|EMBL:CBK99606.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_908_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13270..13374)
DNA (105bp) protein (35aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K006_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99605.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_908_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13506..14750)
DNA (1245bp) protein (415aa)
Transporter, CPA2 family (2.A.37) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K005_9FIRM
transporter, CPA2 family (2.A.37)
Transporter, CPA2 family (2.A.37) {ECO:0000313|EMBL:CBK99604.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_908_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15056..16084)
DNA (1029bp) protein (343aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K004_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBK99603.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_908_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16308..17885
DNA (1578bp) protein (526aa)
ATP-dependent DNA helicase, RecQ family (EC:3.6.1.-)
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:CBK99602.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBK99602.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ATP-dependent DNA helicase, RecQ family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K003_9FIRM
L2_047_362G1_scaffold_908_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17949..18503)
DNA (555bp) protein (185aa)
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.97.1.4 1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K002_9FIRM
L2_047_362G1_scaffold_908_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18616..20787)
DNA (2172bp) protein (724aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CBK99600.1}; EC=1.17.4.2 {ECO:0000313|EMBL:CBK99600.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K001_9FIRM
Displaying 18 items

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