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L2_047_362G1_scaffold_918

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_918_1
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..450)
DNA (450bp) protein (150aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9R3_CLOSV
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CDE05345.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L2_047_362G1_scaffold_918_2
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(549..887)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium NEF1 RepID=U7T1B8_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOS80391.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
HipA-like protein
L2_047_362G1_scaffold_918_3
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(884..1306)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6BXZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA68090.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
hypothetical protein
L2_047_362G1_scaffold_918_4
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2008..3930)
DNA (1923bp) protein (641aa)
Transcriptional regulator n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JQT7_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDB63675.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
putative LysR-family transcriptional regulator
L2_047_362G1_scaffold_918_5
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4238..5314
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6K0R4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63676.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
TctC
L2_047_362G1_scaffold_918_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5448..5918
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ58570.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_047_362G1_scaffold_918_7
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5932..7467
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JLE0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63678.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L2_047_362G1_scaffold_918_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7460..8557
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ58568.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_047_362G1_scaffold_918_9
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8571..10607
DNA (2037bp) protein (679aa)
Glycoside Hydrolase n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JQU1_9CLOT
Glycoside Hydrolase {ECO:0000313|EMBL:CDB63680.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
glycoside hydrolase family protein
L2_047_362G1_scaffold_918_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10622..11716
DNA (1095bp) protein (365aa)
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:EEQ58566.1}; EC=3.2.1.- {ECO:0000313|EMBL:EEQ58566.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Glycosyl hydrolase, family 88 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEW9_9FIRM
glycosyl hydrolase family protein
L2_047_362G1_scaffold_918_11
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11728..13248
DNA (1521bp) protein (507aa)
galactarate dehydratase (EC:4.2.1.42)
Galactarate dehydratase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LJ21_9FIRM
Galactarate dehydratase {ECO:0000313|EMBL:EOS58341.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L2_047_362G1_scaffold_918_12
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13300..14184
DNA (885bp) protein (295aa)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LJP7_9FIRM
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EOS58768.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
2-hydroxy-3-oxopropionate reductase
L2_047_362G1_scaffold_918_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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14197..15096
DNA (900bp) protein (300aa)
Dihydrodipicolinate synthetase family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRG7_9FIRM
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:EHM49371.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
dihydrodipicolinate synthase
L2_047_362G1_scaffold_918_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15124..16374
DNA (1251bp) protein (417aa)
glycerate 2-kinase (EC:1.1.1.81 2.7.1.-)
Glycerate 2-kinase {ECO:0000313|EMBL:CBL02226.1}; EC=1.1.1.81 {ECO:0000313|EMBL:CBL02226.1};; EC=2.7.1.- {ECO:0000313|EMBL:CBL02226.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Glycerate 2-kinase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KBL3_9FIRM
L2_047_362G1_scaffold_918_15
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16361..16513
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FAV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62850.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hydrolase
L2_047_362G1_scaffold_918_16
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16537..17265
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FAV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97316.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hydrolase
L2_047_362G1_scaffold_918_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17289..18143
DNA (855bp) protein (285aa)
AP endonuclease, family 2 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZL83_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:EFQ06063.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Sugar phosphate isomerases/epimerases
L2_047_362G1_scaffold_918_18
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18858..19151)
DNA (294bp) protein (98aa)
Transposase IS66 n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I6W2_CLOCE
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:ACL76954.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
L2_047_362G1_scaffold_918_19
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19208..20323)
DNA (1116bp) protein (372aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKZ7_CLOSC
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBK78371.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_047_362G1_scaffold_918_20
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20395..21087)
DNA (693bp) protein (231aa)
Virulence protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JT27_9CLOT
Virulence protein {ECO:0000313|EMBL:CDB64445.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Virulence protein
Displaying 20 items

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