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L2_047_362G1_scaffold_1010

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_1010_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1138
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45377.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Relaxase/Mobilisation nuclease domain.
L2_047_362G1_scaffold_1010_2
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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comp(1232..1630)
DNA (399bp) protein (133aa)
Uncharacterized protein MJ0357 id=4370255 bin=GWF2_Firmicute_57_13 species=Methanocaldococcus jannaschii genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_Firmicute_57_13 organism_group=Firmicute
protein export chaperone secb
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
L2_047_362G1_scaffold_1010_3
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(1627..2190)
DNA (564bp) protein (188aa)
Helix-turn-helix domain-containing protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EM82_9FIRM
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:CCX89772.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
XRE family transcriptional regulator
L2_047_362G1_scaffold_1010_4
unknown

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comp(2253..2582)
DNA (330bp) protein (110aa)

This feature has no annotations

L2_047_362G1_scaffold_1010_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2695..2901)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20564.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L2_047_362G1_scaffold_1010_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2905..6111)
DNA (3207bp) protein (1069aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7HAE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95096.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
L2_047_362G1_scaffold_1010_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6211..8283)
DNA (2073bp) protein (691aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH89_9FIRM
L2_047_362G1_scaffold_1010_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8280..9002)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9W1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01624.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_362G1_scaffold_1010_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8992..9243)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9Z1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95283.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_047_362G1_scaffold_1010_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9262..11247)
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45385.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
DNA-repair protein
L2_047_362G1_scaffold_1010_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11244..12140)
DNA (897bp) protein (299aa)
Site-specific DNA methylase (EC:2.1.1.37)
Site-specific DNA methylase {ECO:0000313|EMBL:CBL01622.1}; EC=2.1.1.37 {ECO:0000313|EMBL:CBL01622.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Site-specific DNA methylase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9V9_9FIRM
L2_047_362G1_scaffold_1010_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12137..14539)
DNA (2403bp) protein (801aa)
Uncharacterized protein n=2 Tax=root RepID=T5RY25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQN60269.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Type IV secretory pathway, VirB4 component
L2_047_362G1_scaffold_1010_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14907..15770)
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SHI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95274.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_047_362G1_scaffold_1010_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15874..16089)
DNA (216bp) protein (72aa)
Uncharacterized protein n=3 Tax=Ruminococcaceae RepID=A8SA44_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01620.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_362G1_scaffold_1010_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16152..16898)
DNA (747bp) protein (249aa)
Type IV secretory pathway, VirD4 components n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9V6_9FIRM
Type IV secretory pathway, VirD4 components
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CBL01619.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_362G1_scaffold_1010_16
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17090..17455)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=U7SBN0_ENTFL
Uncharacterized protein {ECO:0000313|EMBL:EGX69364.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L2_047_362G1_scaffold_1010_17
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17534..17725)
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKN0_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK78254.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_047_362G1_scaffold_1010_18
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17769..18632)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9W9C2_9CLOT
phage DNA replication protein (predicted replicative helicase loader)
Phage DNA replication protein (Predicted replicative helicase loader) {ECO:0000313|EMBL:CBK78253.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_047_362G1_scaffold_1010_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18629..18967)
DNA (339bp) protein (113aa)
Phage replisome organizer N-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCH7_9FIRM
Phage replisome organizer N-terminal domain protein {ECO:0000313|EMBL:EDP21245.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
phage protein
Displaying 19 items

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