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L2_047_362G1_scaffold_1115

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_1115_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(297..788)
DNA (492bp) protein (164aa)
UPI0003D5BA74 related cluster n=1 Tax=unknown RepID=UPI0003D5BA74
Integrase/recombinase {ECO:0000313|EMBL:ETI88119.1}; Flags: Fragment;; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Site-specific recombinase XerD
L2_047_362G1_scaffold_1115_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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985..2259
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J833_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78485.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DEAD/DEAH box helicase
L2_047_362G1_scaffold_1115_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2428..3345
DNA (918bp) protein (306aa)
Tyrosine recombinase XerC n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J832_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Site-specific recombinase XerD
L2_047_362G1_scaffold_1115_4
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3616..4026
DNA (411bp) protein (137aa)
Peptide deformylase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZSH3_9FIRM
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
N-formylmethionyl-tRNA deformylase
L2_047_362G1_scaffold_1115_5
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4129..5511
DNA (1383bp) protein (461aa)
DNA topoisomerase I n=1 Tax=Clostridium sp. CAG:632 RepID=R5K0N4_9CLOT
DNA topoisomerase I {ECO:0000313|EMBL:CCY58614.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
Topoisomerase DNA binding C4 zinc finger.
L2_047_362G1_scaffold_1115_6
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5631..6113
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZI6_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL06212.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_047_362G1_scaffold_1115_7
Johnsonella ignava, Johnsonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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6110..6349
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZI5_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHI56633.1}; TaxID=679200 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Johnsonella.;" source="Johnsonella ignava ATCC 51276.;"
L2_047_362G1_scaffold_1115_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6353..6574
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZI4_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL06210.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_047_362G1_scaffold_1115_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6853..7359
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4R0_9FIRM
conserved hypothetical protein (putative transposase or invertase)
Uncharacterized protein {ECO:0000313|EMBL:CBL26222.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_362G1_scaffold_1115_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7359..7529
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DIB7_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK77441.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_047_362G1_scaffold_1115_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7721..8893
DNA (1173bp) protein (391aa)
ABC transporter, ATP-binding protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SKY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN46822.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC-type multidrug transport system, ATPase and permease components
L2_047_362G1_scaffold_1115_12
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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8918..9367
DNA (450bp) protein (150aa)
ABC transporter, ATP-binding protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RXU8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFF69180.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
ABC-type multidrug transport system, ATPase and permease components
L2_047_362G1_scaffold_1115_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9386..9841
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CHZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30194.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_047_362G1_scaffold_1115_14
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10169..10747
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000317BC58
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:CDE18812.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
putative TetR family transcriptional regulator
L2_047_362G1_scaffold_1115_15
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10859..11473
DNA (615bp) protein (205aa)
Methyltransferase domain protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AHZ7_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:CDA51573.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L2_047_362G1_scaffold_1115_16

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11475..12080
DNA (606bp) protein (202aa)
methyltransferase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031364F7
Methyltransferase, UbiE/COQ5 family {ECO:0000313|EMBL:EKC76671.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L2_047_362G1_scaffold_1115_17
Treponema phagedenis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12093..12998
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Lachnobacterium bovis RepID=UPI0003B31454
Uncharacterized protein {ECO:0000313|EMBL:CEM63255.1}; TaxID=162 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema phagedenis.;"
putative esterase
L2_047_362G1_scaffold_1115_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13043..13726
DNA (684bp) protein (228aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYW5_9FIRM
Methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CBK99214.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_1115_19
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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13777..14499
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTP6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL41188.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_047_362G1_scaffold_1115_20
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14505..15281
DNA (777bp) protein (259aa)
Predicted divalent heavy-metal cations transporter n=1 Tax=Clostridium sp. CAG:352 RepID=R6RXC3_9CLOT
Predicted divalent heavy-metal cations transporter {ECO:0000313|EMBL:CCZ19623.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
Predicted divalent heavy-metal cations transporter
L2_047_362G1_scaffold_1115_21

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15290..15691
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000311DFA6
Uncharacterized protein {ECO:0000313|EMBL:EKC46849.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_047_362G1_scaffold_1115_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15794..16636
DNA (843bp) protein (281aa)
O-Methyltransferase involved in polyketide biosynthesis n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8C4_9FIRM
O-Methyltransferase involved in polyketide biosynthesis
O-Methyltransferase involved in polyketide biosynthesis {ECO:0000313|EMBL:CBL01087.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_047_362G1_scaffold_1115_23
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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16633..16779
DNA (147bp) protein (49aa)
Ketopantoate reductase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTP9_9FIRM
Ketopantoate reductase
Ketopantoate reductase {ECO:0000313|EMBL:CBL41191.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_047_362G1_scaffold_1115_24
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16949..17518
DNA (570bp) protein (190aa)
Resolvase, N terminal domain protein n=3 Tax=root RepID=T4E1N7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHE99975.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
site-specific recombinase, resolvase family protein
Displaying 24 items

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