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L2_047_362G1_scaffold_1665

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_1665_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(131..541)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CCC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75849.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_047_362G1_scaffold_1665_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(548..1171)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000382359D
Uncharacterized protein {ECO:0000313|EMBL:CDD75850.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Helix-turn-helix domain of resolvase.
L2_047_362G1_scaffold_1665_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1328..2686)
DNA (1359bp) protein (453aa)
dipeptidase, putative (EC:3.5.1.18)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000305B75C
Uncharacterized protein {ECO:0000313|EMBL:EES76819.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_362G1_scaffold_1665_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2830..3480)
DNA (651bp) protein (217aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76820.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_362G1_scaffold_1665_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3480..4037)
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JDS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76821.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_047_362G1_scaffold_1665_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4049..5023)
DNA (975bp) protein (325aa)
Inosine-uridine nucleoside N-ribohydrolase (EC:3.2.2.1)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76822.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_047_362G1_scaffold_1665_7
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5286..5759
DNA (474bp) protein (158aa)
nitrate ABC transporter substrate-binding protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003132D40
Uncharacterized protein {ECO:0000313|EMBL:EDM86102.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L2_047_362G1_scaffold_1665_8
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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comp(5873..6676)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PRH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC26115.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L2_047_362G1_scaffold_1665_9
unknown

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comp(6678..6899)
DNA (222bp) protein (74aa)

This feature has no annotations

L2_047_362G1_scaffold_1665_10
Firmicutes bacterium CAG:536, Firmicutes, Bacteria

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comp(6935..7588)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5Z7Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA34990.1}; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:536.;"
hypothetical protein
L2_047_362G1_scaffold_1665_11
Firmicutes bacterium CAG:536, Firmicutes, Bacteria

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comp(7592..8848)
DNA (1257bp) protein (419aa)
Putative abortive infection protein n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5Z5H7_9FIRM
Putative abortive infection protein {ECO:0000313|EMBL:CDA34988.1}; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:536.;"
Predicted ATPases
L2_047_362G1_scaffold_1665_12
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9314..10153)
DNA (840bp) protein (280aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWE3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDM86097.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L2_047_362G1_scaffold_1665_13
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10479..10868
DNA (390bp) protein (130aa)
CHC2 zinc finger domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWE2_9FIRM
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EDM86096.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
DNA primase (bacterial type)
L2_047_362G1_scaffold_1665_14
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10964..12088
DNA (1125bp) protein (375aa)
Phage/plasmid primase, P4 family domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWE1_9FIRM
Phage/plasmid primase, P4 family domain protein {ECO:0000313|EMBL:EDM86095.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
phage/plasmid primase, P4 family, C-terminal domain
Displaying 14 items

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