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L2_047_362G1_scaffold_425

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_425_1
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

96..2420
DNA (2325bp) protein (775aa)
Glycosyl hydrolase family 20, catalytic domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MA22_9BACT
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:EFR58225.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
N-acetyl-beta-hexosaminidase
L2_047_362G1_scaffold_425_2
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2435..3046
DNA (612bp) protein (204aa)
RNA polymerase sigma-70 factor, Bacteroides expansion family 1 n=2 Tax=Alistipes RepID=I3YKE3_ALIFI
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor Bacteroides expansion family 1 {ECO:0000313|EMBL:CCZ76264.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_362G1_scaffold_425_3
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3155..4123
DNA (969bp) protein (323aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Alistipes sp. HGB5 RepID=E4MA20_9BACT
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EFR58247.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Fe2+-dicitrate sensor membrane protein
L2_047_362G1_scaffold_425_4
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4300..7596
DNA (3297bp) protein (1099aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Alistipes sp. HGB5 RepID=E4MA19_9BACT
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFR58235.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
SusC/RagA family TonB-linked outer membrane protein
L2_047_362G1_scaffold_425_5
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7610..9136
DNA (1527bp) protein (509aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YKE0_ALIFI
Uncharacterized protein {ECO:0000313|EMBL:CCZ76261.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L2_047_362G1_scaffold_425_6
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9165..10286
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YKD9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77457.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_362G1_scaffold_425_7
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10313..11482
DNA (1170bp) protein (390aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YKD8_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ76259.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_362G1_scaffold_425_8
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11570..12526
DNA (957bp) protein (319aa)
F5/8 type C domain-containing protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UDB6_9BACT
F5/8 type C domain-containing protein {ECO:0000313|EMBL:CCZ76258.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
F5/8 type C domain-containing protein
L2_047_362G1_scaffold_425_9
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12676..13887
DNA (1212bp) protein (404aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Alistipes RepID=I3YKD6_ALIFI
S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)
L2_047_362G1_scaffold_425_10
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14010..14555)
DNA (546bp) protein (182aa)
RNA polymerase sigma-70 factor n=1 Tax=Alistipes sp. HGB5 RepID=E4MA13_9BACT
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EFR58243.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
RNA polymerase sigma-70 factor
L2_047_362G1_scaffold_425_11
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14755..15816)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YKD3_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77451.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_362G1_scaffold_425_12
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15842..16741)
DNA (900bp) protein (300aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=Alistipes RepID=E4MA11_9BACT
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EFR58233.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
metal-dependent hydrolase
L2_047_362G1_scaffold_425_13
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16775..18547)
DNA (1773bp) protein (591aa)
RagB/SusD family protein n=3 Tax=Alistipes RepID=I3YKD1_ALIFI
RagB/SusD family protein {ECO:0000313|EMBL:CCZ76253.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
RagB/SusD family protein
L2_047_362G1_scaffold_425_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18564..22079)
DNA (3516bp) protein (1172aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YKD0_ALIFI
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AFL77448.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
SusC/RagA family TonB-linked outer membrane protein
L2_047_362G1_scaffold_425_15
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22206..23207)
DNA (1002bp) protein (334aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Alistipes sp. HGB5 RepID=E4MA08_9BACT
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EFR58229.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Fe2+-dicitrate sensor membrane protein
L2_047_362G1_scaffold_425_16
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23379..23879)
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4MA07_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76159.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L2_047_362G1_scaffold_425_17
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23923..25074)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MA06_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR58240.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
CPA2 family transporter
L2_047_362G1_scaffold_425_18
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25303..26604
DNA (1302bp) protein (434aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Enolase n=3 Tax=Alistipes RepID=I3YKA2_ALIFI
phosphopyruvate hydratase
L2_047_362G1_scaffold_425_19
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26746..27123)
DNA (378bp) protein (126aa)
Putative fluoride ion transporter CrcB n=3 Tax=Alistipes RepID=I3YKA1_ALIFI
crcB protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_047_362G1_scaffold_425_20
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27340..27642
DNA (303bp) protein (101aa)
Urease subunit gamma {ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|RuleBase:RU003850};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Urease subunit gamma n=3 Tax=Alistipes RepID=I3YKA0_ALIFI
urease subunit gamma
L2_047_362G1_scaffold_425_21
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27660..28187
DNA (528bp) protein (176aa)
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Urease, beta subunit n=2 Tax=Alistipes RepID=E4MA02_9BACT
urease subunit beta
L2_047_362G1_scaffold_425_22
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28193..29911
DNA (1719bp) protein (573aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Urease subunit alpha n=2 Tax=Alistipes RepID=E4MA01_9BACT
urease subunit alpha
L2_047_362G1_scaffold_425_23
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30052..30627
DNA (576bp) protein (192aa)
Urease accessory protein UreE n=3 Tax=Alistipes RepID=I3YK97_ALIFI
urease accessory protein UreE
Urease accessory protein UreE {ECO:0000313|EMBL:CCZ76166.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_362G1_scaffold_425_24
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30617..31330
DNA (714bp) protein (238aa)
Urease accessory protein UreF n=1 Tax=Alistipes sp. HGB5 RepID=E4M9Z9_9BACT
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
urease accessory protein UreF
L2_047_362G1_scaffold_425_25
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31371..32042
DNA (672bp) protein (224aa)
Urease accessory protein UreG n=3 Tax=Alistipes RepID=I3YK95_ALIFI
urease accessory protein UreG
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L2_047_362G1_scaffold_425_26
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32039..32953
DNA (915bp) protein (305aa)
Urease accessory protein UreD n=1 Tax=Alistipes sp. HGB5 RepID=E4M9Z7_9BACT
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
urease accessory protein UreH
L2_047_362G1_scaffold_425_27
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32985..34028
DNA (1044bp) protein (348aa)
Urea transporter n=1 Tax=Alistipes sp. HGB5 RepID=E4M9Z6_9BACT
Urea transporter {ECO:0000313|EMBL:EFR58238.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
urea transporter
L2_047_362G1_scaffold_425_28
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34097..35083
DNA (987bp) protein (329aa)
Cobalamin biosynthesis protein CbiM n=1 Tax=Alistipes sp. HGB5 RepID=E4M9Z5_9BACT
Cobalamin biosynthesis protein CbiM {ECO:0000313|EMBL:EFR58217.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Co2+ ABC transporter permease
L2_047_362G1_scaffold_425_29
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35122..35895
DNA (774bp) protein (258aa)
Cobalt ABC transporter, permease protein CbiQ n=3 Tax=Alistipes RepID=I3YK91_ALIFI
cobalt ABC transporter permease CbiQ
Cobalt ABC transporter permease protein CbiQ {ECO:0000313|EMBL:CCZ76172.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_047_362G1_scaffold_425_30
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35897..36658
DNA (762bp) protein (254aa)
ABC-type cobalt transport system, ATPase component n=3 Tax=Alistipes RepID=I3YK90_ALIFI
cobalt ABC transporter ATPase
ABC-type cobalt transport system ATPase component {ECO:0000313|EMBL:CCZ76173.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Displaying items 1-30 of 34 in total

View Taxonomy