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L2_047_362G1_scaffold_45

Search features with annotation key words

Displaying items 1-30 of 417 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_45_1
unknown

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comp(1..141)
DNA (141bp) protein (47aa)

This feature has no annotations

L2_047_362G1_scaffold_45_2
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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544..1191
DNA (648bp) protein (216aa)
RNA polymerase sigma-H factor n=1 Tax=Clostridium sp. CAG:440 RepID=R7GEP6_9CLOT
RNA polymerase sigma-H factor {ECO:0000313|EMBL:CDE24417.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
RNA polymerase sigma-H factor
L2_047_362G1_scaffold_45_3
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1832..3766
DNA (1935bp) protein (645aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
Threonine--tRNA ligase n=1 Tax=Clostridium sp. CAG:343 RepID=R6PCI9_9CLOT
threonyl-tRNA synthase
L2_047_362G1_scaffold_45_4
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4077..4436
DNA (360bp) protein (120aa)
50S ribosomal protein L21 n=1 Tax=Clostridium sp. CAG:343 RepID=R6PBK6_9CLOT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
50S ribosomal protein L21
L2_047_362G1_scaffold_45_5
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4491..4751
DNA (261bp) protein (87aa)
50S ribosomal protein L27 n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5F4_9CLOT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
50S ribosomal protein L27
L2_047_362G1_scaffold_45_6
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4983..6275
DNA (1293bp) protein (431aa)
Glycosyl transferase group 1 n=1 Tax=Clostridium sp. CAG:343 RepID=R6N7F1_9CLOT
Glycosyl transferase group 1 {ECO:0000313|EMBL:CDC07000.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
group 1 glycosyl transferase
L2_047_362G1_scaffold_45_7
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6756..7658
DNA (903bp) protein (301aa)
GTPase Era n=1 Tax=Clostridium sp. CAG:389 RepID=R7LTM8_9CLOT
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
era; Era
L2_047_362G1_scaffold_45_8
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7684..7944
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GCD2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE24666.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L2_047_362G1_scaffold_45_9
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8014..8742
DNA (729bp) protein (243aa)
DNA repair protein RecO n=1 Tax=Clostridium sp. CAG:389 RepID=R7LRD8_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
DNA replication and repair protein RecO
L2_047_362G1_scaffold_45_10
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9074..9601
DNA (528bp) protein (176aa)
SSU ribosomal protein S30P n=1 Tax=Clostridium sp. CAG:389 RepID=R7LSN9_9CLOT
SSU ribosomal protein S30P {ECO:0000313|EMBL:CDE91106.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
SSU ribosomal protein S30P
L2_047_362G1_scaffold_45_11
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9803..10000)
DNA (198bp) protein (66aa)
Small acid-soluble spore protein alpha/beta type n=1 Tax=Clostridium sp. CAG:440 RepID=R7GC20_9CLOT
Small acid-soluble spore protein alpha/beta type {ECO:0000313|EMBL:CDE24670.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
small, acid-soluble spore protein, alpha/beta type
L2_047_362G1_scaffold_45_12
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10291..11262
DNA (972bp) protein (324aa)
Cof-like hydrolase n=1 Tax=Clostridium sp. CAG:343 RepID=R6NF83_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:CDC07009.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
cof family hydrolase
L2_047_362G1_scaffold_45_13
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11502..12467
DNA (966bp) protein (322aa)
SAF domain protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F5Z5_9CLOT
SAF domain protein {ECO:0000313|EMBL:CDE09933.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L2_047_362G1_scaffold_45_14
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12483..13181
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FKV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE14352.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
pPPM1a_131; hypothetical protein
L2_047_362G1_scaffold_45_15
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13184..14032
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:575 RepID=R6H4G9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB31660.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein
L2_047_362G1_scaffold_45_16
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14050..15996
DNA (1947bp) protein (649aa)
AAA ATPase n=1 Tax=Clostridium sp. CAG:343 RepID=R6NF85_9CLOT
AAA ATPase {ECO:0000313|EMBL:CDC07014.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
Flp pilus assembly protein, ATPase CpaF
L2_047_362G1_scaffold_45_17
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16060..18111
DNA (2052bp) protein (684aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N7H3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07015.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L2_047_362G1_scaffold_45_18
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18127..18840
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GC31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE24680.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L2_047_362G1_scaffold_45_19
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18842..19330
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GCE8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE24681.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L2_047_362G1_scaffold_45_20
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19372..19803
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GFF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE24682.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L2_047_362G1_scaffold_45_21
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19874..20296
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LQF8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE90765.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
L2_047_362G1_scaffold_45_22
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20324..20965
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GBB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE24684.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L2_047_362G1_scaffold_45_23
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21001..21534
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NLA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07021.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
M1_2933; hypothetical protein
L2_047_362G1_scaffold_45_24
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21620..23239
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GCF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE24686.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L2_047_362G1_scaffold_45_25
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23376..24539
DNA (1164bp) protein (388aa)
Stage IV sporulation protein B n=1 Tax=Clostridium sp. CAG:343 RepID=R6NKY3_9CLOT
Stage IV sporulation protein B {ECO:0000313|EMBL:CDC06896.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
SpoIVB peptidase
L2_047_362G1_scaffold_45_26
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24722..26104)
DNA (1383bp) protein (461aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Clostridium sp. CAG:470 RepID=R7FGB3_9CLOT
L2_047_362G1_scaffold_45_27
Clostridium sp. CAG:508, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26382..26654
DNA (273bp) protein (91aa)
Putative septation protein SpoVG n=1 Tax=Clostridium sp. CAG:508 RepID=R6QLW4_9CLOT
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=1262815 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:508.;"
stage V sporulation protein G
L2_047_362G1_scaffold_45_28
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26866..27423
DNA (558bp) protein (186aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
pth; peptidyl-tRNA hydrolase Pth (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Clostridium sp. CAG:343 RepID=R6PAH3_9CLOT
L2_047_362G1_scaffold_45_29
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27552..28739
DNA (1188bp) protein (396aa)
RNAse G n=1 Tax=Clostridium sp. CAG:470 RepID=R7FJT3_9CLOT
RNAse G {ECO:0000313|EMBL:CDE14886.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
ribonuclease, Rne/Rng family
L2_047_362G1_scaffold_45_30
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28880..30277
DNA (1398bp) protein (466aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
MiaB-like tRNA modifying enzyme YliG (EC:1.3.1.74)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Clostridium sp. CAG:343 RepID=R6N712_9CLOT
Displaying items 1-30 of 417 in total

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