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L2_047_362G1_scaffold_472

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_472_1
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..864
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GCV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE25219.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L2_047_362G1_scaffold_472_2
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1429..1779
DNA (351bp) protein (117aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
mRNA interferase n=1 Tax=Clostridium sp. CAG:343 RepID=R6NJ21_9CLOT
growth inhibitor
L2_047_362G1_scaffold_472_3
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2051..2998)
DNA (948bp) protein (316aa)
Response regulator n=1 Tax=Clostridium sp. CAG:440 RepID=R7G9T3_9CLOT
Response regulator {ECO:0000313|EMBL:CDE24139.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
putative PAS/PAC sensor protein
L2_047_362G1_scaffold_472_4
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3247..5001
DNA (1755bp) protein (585aa)
Aspartate--tRNA ligase n=1 Tax=Clostridium sp. CAG:343 RepID=R6N3I3_9CLOT
Aspartate--tRNA ligase 1 {ECO:0000313|EMBL:CDC05590.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
aspartyl-tRNA synthetase
L2_047_362G1_scaffold_472_5
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5087..5344
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:575 RepID=R6H2T3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB32038.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
hypothetical protein
L2_047_362G1_scaffold_472_6
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5668..6459)
DNA (792bp) protein (264aa)
Polysaccharide deacetylase n=1 Tax=Clostridium sp. CAG:343 RepID=R6NJM8_9CLOT
Polysaccharide deacetylase {ECO:0000313|EMBL:CDC06451.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
polysaccharide deacetylase family protein
L2_047_362G1_scaffold_472_7
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6704..7393)
DNA (690bp) protein (230aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 1A family n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5X3_9CLOT
Penicillin-binding protein 1A family {ECO:0000313|EMBL:CDC06450.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L2_047_362G1_scaffold_472_8
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7668..8504
DNA (837bp) protein (279aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Clostridium sp. CAG:470 RepID=R7FJ70_9CLOT
L2_047_362G1_scaffold_472_9
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8600..9835
DNA (1236bp) protein (412aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83)
LL-diaminopimelate aminotransferase n=1 Tax=Clostridium sp. CAG:440 RepID=R7GAD8_9CLOT
L2_047_362G1_scaffold_472_10
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10013..10567
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N3N1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06588.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
conserved hypothetical protein
L2_047_362G1_scaffold_472_11
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10731..11330
DNA (600bp) protein (200aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Clostridium sp. CAG:343 RepID=R6NE25_9CLOT
ruvA; Holliday junction DNA helicase RuvA
L2_047_362G1_scaffold_472_12
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11525..12769
DNA (1245bp) protein (415aa)
AAA ATPase n=1 Tax=Clostridium sp. CAG:389 RepID=R7LRK5_9CLOT
AAA ATPase {ECO:0000313|EMBL:CDE90711.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
AAA ATPase
L2_047_362G1_scaffold_472_13
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13060..13290
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LPL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE90709.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
L2_047_362G1_scaffold_472_14
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13328..13675
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6P9N7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06592.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
permease
L2_047_362G1_scaffold_472_15
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13706..14113
DNA (408bp) protein (136aa)
Putative permease n=1 Tax=Clostridium sp. CAG:343 RepID=R6N3N4_9CLOT
Putative permease {ECO:0000313|EMBL:CDC06593.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
putative permease
L2_047_362G1_scaffold_472_16
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14155..14295
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NE28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06594.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L2_047_362G1_scaffold_472_17
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14361..14825)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N699_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06595.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L2_047_362G1_scaffold_472_18
unknown

Not on your lists

14983..15867
DNA (885bp) protein (295aa)

This feature has no annotations

L2_047_362G1_scaffold_472_19
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15948..22982
DNA (7035bp) protein (2345aa)
Glycosyltransferase 36 n=1 Tax=Clostridium sp. CAG:389 RepID=R7LPL2_9CLOT
Glycosyltransferase 36 {ECO:0000313|EMBL:CDE90704.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
glycosyltransferase
L2_047_362G1_scaffold_472_20
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22939..24189
DNA (1251bp) protein (417aa)
Glycosyltransferase 36 n=1 Tax=Clostridium sp. CAG:389 RepID=R7LPL2_9CLOT
Glycosyltransferase 36 {ECO:0000313|EMBL:CDE90704.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
cellobiose phosphorylase
L2_047_362G1_scaffold_472_21
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24627..25055)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FGN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE13806.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
Putative peptidoglycan-binding domain-containing protein
L2_047_362G1_scaffold_472_22
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25290..25670)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GBR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE24824.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
hypothetical protein
L2_047_362G1_scaffold_472_23
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25967..26413
DNA (447bp) protein (149aa)
Protein MraZ n=1 Tax=Clostridium sp. CAG:343 RepID=R6N0U0_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
mraZ protein
L2_047_362G1_scaffold_472_24
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26754..27683
DNA (930bp) protein (310aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:470 RepID=R7FI33_9CLOT
mraW; S-adenosyl-methyltransferase MraW
L2_047_362G1_scaffold_472_25
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27716..28219
DNA (504bp) protein (168aa)
Cell division protein FtsL n=1 Tax=Clostridium sp. CAG:343 RepID=R6N3G9_9CLOT
Cell division protein FtsL {ECO:0000313|EMBL:CDC05575.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
Cell division protein FtsL
L2_047_362G1_scaffold_472_26
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28368..30359
DNA (1992bp) protein (664aa)
Penicillin-binding protein transpeptidase n=1 Tax=Clostridium sp. CAG:470 RepID=R7FHM7_9CLOT
Penicillin-binding protein transpeptidase {ECO:0000313|EMBL:CDE14156.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
cell division protein FtsI/penicillin-binding protein 2
L2_047_362G1_scaffold_472_27
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30461..31045
DNA (585bp) protein (195aa)
Isopentenyldiphosphate isomerase n=1 Tax=Clostridium sp. CAG:440 RepID=R7GBZ3_9CLOT
Isopentenyldiphosphate isomerase {ECO:0000313|EMBL:CDE24308.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
NUDIX hydrolase
L2_047_362G1_scaffold_472_28
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31385..32878
DNA (1494bp) protein (498aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Clostridium sp. CAG:343 RepID=R6NBA9_9CLOT
L2_047_362G1_scaffold_472_29
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32912..33892
DNA (981bp) protein (327aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Clostridium sp. CAG:440 RepID=R7GCD1_9CLOT
L2_047_362G1_scaffold_472_30
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33924..35057
DNA (1134bp) protein (378aa)
Cell division protein FtsW n=1 Tax=Clostridium sp. CAG:343 RepID=R6N3E9_9CLOT
Cell division protein FtsW {ECO:0000313|EMBL:CDC05550.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
cell division protein FtsW
Displaying items 1-30 of 35 in total

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