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L2_047_362G1_scaffold_550

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_550_1
unknown

Not on your lists

comp(3..71)
DNA (69bp) protein (23aa)

This feature has no annotations

L2_047_362G1_scaffold_550_2
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(101..943)
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6KFB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB60892.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L2_047_362G1_scaffold_550_3
unknown

Not on your lists

comp(1050..1247)
DNA (198bp) protein (66aa)

This feature has no annotations

L2_047_362G1_scaffold_550_4
Mycoplasma sp. CAG:956, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(1262..1594)
DNA (333bp) protein (111aa)
Predicted transcriptional regulators n=1 Tax=Mycoplasma sp. CAG:956 RepID=R5M8C1_9MOLU
Predicted transcriptional regulators {ECO:0000313|EMBL:CCY87925.1}; TaxID=1262908 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:956.;"
Predicted transcriptional regulators
L2_047_362G1_scaffold_550_5
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1773..2192)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L1R3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY66992.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L2_047_362G1_scaffold_550_6

Not on your lists

comp(2294..2917)
DNA (624bp) protein (208aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1S7M8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC56557.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
L2_047_362G1_scaffold_550_7
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2973..3176)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FNH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE15227.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon domain-containing protein
L2_047_362G1_scaffold_550_8
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3192..3443)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:452 RepID=R6YDE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD26621.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
L2_047_362G1_scaffold_550_9
unknown

Not on your lists

comp(3518..3733)
DNA (216bp) protein (72aa)

This feature has no annotations

L2_047_362G1_scaffold_550_10
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3749..4015)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6NMT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07506.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L2_047_362G1_scaffold_550_11
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4177..4452
DNA (276bp) protein (92aa)
Bacterial nucleoid DNA-binding protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NDG6_9CLOT
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:CDC06369.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
histone family protein DNA-binding protein
L2_047_362G1_scaffold_550_12
unknown

Not on your lists

comp(4511..4741)
DNA (231bp) protein (77aa)

This feature has no annotations

L2_047_362G1_scaffold_550_13
unknown

Not on your lists

comp(4815..5297)
DNA (483bp) protein (161aa)

This feature has no annotations

L2_047_362G1_scaffold_550_14
unknown

Not on your lists

comp(5290..5433)
DNA (144bp) protein (48aa)

This feature has no annotations

L2_047_362G1_scaffold_550_15
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5408..6133)
DNA (726bp) protein (242aa)
Ribosomal protein S1 n=3 Tax=Clostridium acetobutylicum RepID=F0K7Z1_CLOAE
rpsA; Ribosomal protein S1
Ribosomal protein S1 {ECO:0000313|EMBL:AAK79925.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L2_047_362G1_scaffold_550_16
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6130..6495)
DNA (366bp) protein (122aa)
Plasmid transfer factor TraK n=3 Tax=Clostridium acetobutylicum RepID=F7ZU54_CLOAT
putative plasmid transfer factor, TraK
Possible plasmid transfer factor, TraK {ECO:0000313|EMBL:AAK79929.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L2_047_362G1_scaffold_550_17
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6670..7467)
DNA (798bp) protein (266aa)
ATPase involved in conjugal plasmid transfer n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R8F9_THETN
TraG; conjugal plasmid transfer ATPase
ATPase involved in conjugal plasmid transfer {ECO:0000313|EMBL:AAM25218.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
L2_047_362G1_scaffold_550_18
unknown

Not on your lists

comp(7502..8005)
DNA (504bp) protein (168aa)

This feature has no annotations

L2_047_362G1_scaffold_550_19
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7995..8915)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NE10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06569.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L2_047_362G1_scaffold_550_20
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9070..9666)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZWE5_MAHA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE97554.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L2_047_362G1_scaffold_550_21
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(9736..9996)
DNA (261bp) protein (87aa)
Putative septation protein SpoVG n=10 Tax=Clostridium perfringens RepID=SP5G_CLOP1
regulatory protein SpoVG
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
L2_047_362G1_scaffold_550_22
Clostridium sp. CAG:571, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10014..12575)
DNA (2562bp) protein (854aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:571 RepID=R5XUX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA16324.1}; TaxID=1262822 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:571.;"
hypothetical protein
L2_047_362G1_scaffold_550_23
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12641..13345)
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7G817_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05823.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L2_047_362G1_scaffold_550_24
Clostridium sp. CAG:492, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13424..14005)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:492 RepID=R5YTU3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA30220.1}; TaxID=1262813 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:492.;"
hypothetical protein
L2_047_362G1_scaffold_550_25
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13992..14408)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZWV4_MAHA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE97576.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L2_047_362G1_scaffold_550_26
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14423..14821)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NAY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05459.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L2_047_362G1_scaffold_550_27
unknown

Not on your lists

comp(14766..15164)
DNA (399bp) protein (133aa)

This feature has no annotations

L2_047_362G1_scaffold_550_28
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15161..16633)
DNA (1473bp) protein (491aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:356 RepID=R6Z9X9_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDD37711.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
hypothetical protein
L2_047_362G1_scaffold_550_29
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16646..18523)
DNA (1878bp) protein (626aa)
AAA ATPase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZWX7_MAHA5
ATPase AAA
AAA ATPase {ECO:0000313|EMBL:AEE97599.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
L2_047_362G1_scaffold_550_30
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18498..19208)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:356 RepID=R6YM04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD36983.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
hypothetical protein
Displaying items 1-30 of 49 in total

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