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L2_047_362G1_scaffold_911

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_911_1
unknown

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2..145
DNA (144bp) protein (48aa)

This feature has no annotations

L2_047_362G1_scaffold_911_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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124..345
DNA (222bp) protein (74aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRA4_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCY32265.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
DNA-binding protein
L2_047_362G1_scaffold_911_3
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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332..1126
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZEP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD46858.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
hypothetical protein
L2_047_362G1_scaffold_911_4
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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1139..2056
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RTP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36262.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
sodium transport system ATP-binding protein
L2_047_362G1_scaffold_911_5
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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2053..3285
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R6N2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36263.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
sodium transport system permease
L2_047_362G1_scaffold_911_6
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3393..3827
DNA (435bp) protein (145aa)
membrane protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FBCE50
Uncharacterized protein {ECO:0000313|EMBL:CCY32263.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L2_047_362G1_scaffold_911_7
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3929..4573
DNA (645bp) protein (215aa)
Competence protein ComEA helix-hairpin-helix repeat region n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5H1_9FIRM
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:CCY32262.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
competence protein ComEA helix-hairpin-helix repeat region
L2_047_362G1_scaffold_911_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4586..5275
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I646_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCY32261.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_047_362G1_scaffold_911_9
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5284..6711
DNA (1428bp) protein (476aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain. (EC:2.7.13.3)
His Kinase A (Phosphoacceptor) domain./Histidine kinase-DNA gyrase B-and HSP90-like ATPase./HAMP domain n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GYF6_9FIRM
L2_047_362G1_scaffold_911_10
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6723..7667
DNA (945bp) protein (315aa)
Sporulation and spore germination n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LUS9_9FIRM
Sporulation and spore germination.
Sporulation and spore germination {ECO:0000313|EMBL:CBL24537.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_047_362G1_scaffold_911_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7664..9883
DNA (2220bp) protein (740aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1D1_9FIRM
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:CCY97518.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
DNA internalization-related competence protein ComEC/Rec2
L2_047_362G1_scaffold_911_12
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9939..10922
DNA (984bp) protein (328aa)
DNA polymerase III, delta subunit (EC:2.7.7.7)
DNA polymerase III delta subunit n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GU94_9FIRM
DNA polymerase III delta subunit {ECO:0000313|EMBL:CDE29507.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L2_047_362G1_scaffold_911_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11056..11319)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N405_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
rpsT; 30S ribosomal protein S20
L2_047_362G1_scaffold_911_14
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11519..12424
DNA (906bp) protein (302aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Germination protease. (EC:3.4.24.78)
Germination protease n=2 Tax=Clostridiales RepID=A5ZX31_9FIRM
L2_047_362G1_scaffold_911_15
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12473..13681
DNA (1209bp) protein (403aa)
Stage II sporulation protein P (SpoIIP) n=1 Tax=Blautia sp. CAG:257 RepID=R5WZN4_9FIRM
Stage II sporulation protein P (SpoIIP) {ECO:0000313|EMBL:CDA05484.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
Stage II sporulation protein P (SpoIIP).
L2_047_362G1_scaffold_911_16
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13745..15553
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Elongation factor 4 n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZX33_9FIRM
GTP-binding protein LepA
L2_047_362G1_scaffold_911_17
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15593..15832
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XMA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA05482.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L2_047_362G1_scaffold_911_18
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15829..16959
DNA (1131bp) protein (377aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I8H7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33046.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L2_047_362G1_scaffold_911_19
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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16990..17679
DNA (690bp) protein (230aa)
Predicted alternative thymidylate synthase (EC:2.1.1.148)
Predicted alternative thymidylate synthase n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N7F7_9FIRM
Predicted alternative thymidylate synthase {ECO:0000313|EMBL:CDF08022.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
L2_047_362G1_scaffold_911_20
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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17739..18146
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IPZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23871.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L2_047_362G1_scaffold_911_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18191..18883
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI000381B038
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD24497.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_047_362G1_scaffold_911_22
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18910..19353
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9WT04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFP59887.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
hypothetical protein
L2_047_362G1_scaffold_911_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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19409..19789
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FU74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80367.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_047_362G1_scaffold_911_24
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19806..20678
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EQX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99539.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L2_047_362G1_scaffold_911_25
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20693..21244
DNA (552bp) protein (184aa)
Nucleotidyltransferase domain protein n=3 Tax=Lachnospiraceae RepID=C9L6I6_BLAHA
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:EEX22030.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
nucleotidyltransferase family protein
Displaying 25 items

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