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L2_047_362G1_scaffold_1422

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_1422_1
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..229)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35737.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
transcriptional regulator, BadM/Rrf2 family
L2_047_362G1_scaffold_1422_2
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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565..1947
DNA (1383bp) protein (461aa)
Transporter n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8T2_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Na+-dependent transporters of the SNF family
L2_047_362G1_scaffold_1422_3
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2165..3481)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H839_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF41780.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L2_047_362G1_scaffold_1422_4
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3536..4102)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000366903E
Sigma-70 region 2 {ECO:0000313|EMBL:EJF41773.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
putative RNA polymerase sigma factor 70
L2_047_362G1_scaffold_1422_5
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4369..5097
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035C3E53
Putative N-acetylmuramoyl-L-alanine amidase CwlD {ECO:0000313|EMBL:EJF39973.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
cell wall hydrolase/autolysin
L2_047_362G1_scaffold_1422_6
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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5211..6581
DNA (1371bp) protein (457aa)
DNA repair protein radA n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YRE7_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
DNA repair protein RadA
L2_047_362G1_scaffold_1422_7
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6593..6766)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0MZC3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF39769.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L2_047_362G1_scaffold_1422_8
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6972..7973
DNA (1002bp) protein (334aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium sp. MSTE9 RepID=J0N6R8_9CLOT
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EJF40137.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L2_047_362G1_scaffold_1422_9
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7957..9150
DNA (1194bp) protein (398aa)
ABC transporter substrate-binding protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036484CB
MacB-like periplasmic core domain protein {ECO:0000313|EMBL:EJF40070.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L2_047_362G1_scaffold_1422_10
unknown

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comp(9343..9591)
DNA (249bp) protein (83aa)

This feature has no annotations

L2_047_362G1_scaffold_1422_11
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9974..11041
DNA (1068bp) protein (356aa)
tyrosine recombinase XerC n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003700109
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Site-specific recombinase XerD
L2_047_362G1_scaffold_1422_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11028..12179
DNA (1152bp) protein (384aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EJF41006.1}; EC=2.4.-.- {ECO:0000313|EMBL:EJF41006.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036E34C0
hypothetical protein
L2_047_362G1_scaffold_1422_13
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12391..12984)
DNA (594bp) protein (198aa)
Tyrosine recombinase XerC n=1 Tax=Clostridium sp. MSTE9 RepID=J1H4I2_9CLOT
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
xerD; Tyrosine recombinase XerD
Displaying 13 items

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