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L2_057_000G1_scaffold_5121

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000G1_scaffold_5121_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..194)
DNA (192bp) protein (64aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ecfA1; energy-coupling factor transporter ATP-binding protein EcfA1 (EC:3.6.3.-)
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIP6_9CLOT
L2_057_000G1_scaffold_5121_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(310..651)
DNA (342bp) protein (114aa)
50S ribosomal protein L17 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H674_9CLOT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rplQ; 50S ribosomal protein L17
L2_057_000G1_scaffold_5121_3
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(664..1611)
DNA (948bp) protein (316aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
rpoA; DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridium intestinale URNW RepID=U2Q8E9_9CLOT
L2_057_000G1_scaffold_5121_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1714..2334)
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FQF3_9CLOT
rpsD; ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L2_057_000G1_scaffold_5121_5
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2362..2757)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FDB1_9CLOT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rpsK; 30S ribosomal protein S11
L2_057_000G1_scaffold_5121_6
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2773..3138)
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=2 Tax=environmental samples RepID=R6G0M9_9CLOT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
rpsM; 30S ribosomal protein S13
L2_057_000G1_scaffold_5121_7
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3362..3475)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=4 Tax=Clostridium RepID=L1QJU0_9CLOT
LSU ribosomal protein L36P
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
L2_057_000G1_scaffold_5121_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3519..3737)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=14 Tax=Clostridium RepID=IF1_CLOB8
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075, ECO:0000313|EMBL:AIY79161.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L2_057_000G1_scaffold_5121_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3882..4247)
DNA (366bp) protein (122aa)
map; methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974, ECO:0000313|EMBL:AIY85159.1};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
methionine aminopeptidase n=1 Tax=Clostridium beijerinckii RepID=UPI0002D26789
Displaying 9 items

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