ggKbase home page

L2_057_000G1_scaffold_83

Search features with annotation key words

Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000G1_scaffold_83_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

455..2488
DNA (2034bp) protein (678aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECE1_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA38841.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L2_057_000G1_scaffold_83_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2475..2771
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI09_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36224.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_057_000G1_scaffold_83_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2781..3464
DNA (684bp) protein (228aa)
Peptidase M50 family n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z959_9ACTN
Peptidase M50 family {ECO:0000313|EMBL:CDA36223.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
peptidase M50
L2_057_000G1_scaffold_83_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3549..4358
DNA (810bp) protein (270aa)
ScpA/B protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECD8_9ACTN
ScpA/B protein {ECO:0000313|EMBL:KGI72960.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
condensin subunit ScpA
L2_057_000G1_scaffold_83_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4370..5098
DNA (729bp) protein (243aa)
Segregation and condensation protein B n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECD7_9ACTN
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
condensin subunit ScpB
L2_057_000G1_scaffold_83_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5121..6050
DNA (930bp) protein (310aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBH0_9ACTN
L2_057_000G1_scaffold_83_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6117..6803
DNA (687bp) protein (229aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECD5_9ACTN
L2_057_000G1_scaffold_83_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6807..7535
DNA (729bp) protein (243aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51)
Acyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z952_9ACTN
Acyltransferase {ECO:0000313|EMBL:CDA36218.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_057_000G1_scaffold_83_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7553..8437
DNA (885bp) protein (295aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A508_9ACTN
L2_057_000G1_scaffold_83_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8440..9882
DNA (1443bp) protein (481aa)
Putative FeS-containing Cyanobacterial-specific oxidoreductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECD2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72966.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_057_000G1_scaffold_83_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9893..11227
DNA (1335bp) protein (445aa)
GTPase Der n=2 Tax=Collinsella RepID=A4ECD1_9ACTN
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ribosome-associated GTPase EngA
L2_057_000G1_scaffold_83_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11220..11903
DNA (684bp) protein (228aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECD0_9ACTN
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
L2_057_000G1_scaffold_83_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11913..12920
DNA (1008bp) protein (336aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECC9_9ACTN
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
L2_057_000G1_scaffold_83_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12939..13610
DNA (672bp) protein (224aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A503_9ACTN
L2_057_000G1_scaffold_83_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13617..14795
DNA (1179bp) protein (393aa)
Cysteine desulfurase (EC:2.8.1.7)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPA6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36211.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_057_000G1_scaffold_83_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14792..15601
DNA (810bp) protein (270aa)
Putative dinuclear metal center protein YbgI family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBG3_9ACTN
Putative dinuclear metal center protein YbgI family {ECO:0000313|EMBL:CDA36210.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_057_000G1_scaffold_83_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15598..16317
DNA (720bp) protein (240aa)
Putative zinc ribbon domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHZ8_9ACTN
Putative zinc ribbon domain protein {ECO:0000313|EMBL:CDA36209.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_057_000G1_scaffold_83_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16320..17534
DNA (1215bp) protein (405aa)
Phosphopantothenoylcysteine decarboxylase; Phosphopantothenate-cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z941_9ACTN
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:CDA36208.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_057_000G1_scaffold_83_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18202..18519)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECC2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38822.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_057_000G1_scaffold_83_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18633..19037
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIL4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36449.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_057_000G1_scaffold_83_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19050..19289
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9R4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36448.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_057_000G1_scaffold_83_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19302..19520)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5Q7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36447.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_057_000G1_scaffold_83_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19740..20168)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPZ0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36446.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_057_000G1_scaffold_83_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20170..21984)
DNA (1815bp) protein (605aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAB0_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39433.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L2_057_000G1_scaffold_83_25
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

23438..23641
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4REW7_9BIFI
Uncharacterised protein {ECO:0000313|EMBL:CRH85503.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L2_057_000G1_scaffold_83_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23593..24006)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8D7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40152.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
bacteriocin ABC transporter permease
L2_057_000G1_scaffold_83_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24003..24731)
DNA (729bp) protein (243aa)
Lantibiotic protection ABC transporter, ATP-binding subunit n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFK7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KGI75512.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
multidrug ABC transporter ATPase
L2_057_000G1_scaffold_83_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24808..25653
DNA (846bp) protein (282aa)
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A353_9ACTN
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CDA35542.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
CDP-alcohol phosphatidyltransferase
L2_057_000G1_scaffold_83_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25720..26154
DNA (435bp) protein (145aa)
FHA domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z787_9ACTN
FHA domain protein {ECO:0000313|EMBL:CDA35543.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
FHA domain-containing protein
L2_057_000G1_scaffold_83_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26158..27036
DNA (879bp) protein (293aa)
Transcriptional regulator, MerR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECA5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72977.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
MerR family transcripitonal regulator
Displaying items 1-30 of 146 in total

View Taxonomy