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L2_057_000G1_scaffold_160

Search features with annotation key words

Displaying items 1-30 of 174 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000G1_scaffold_160_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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382..897
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q64VK8_BACFR
hypothetical protein
AAA domain protein {ECO:0000313|EMBL:EXZ83691.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
L2_057_000G1_scaffold_160_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(941..1108)
DNA (168bp) protein (56aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I3HUR4_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY49377.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L2_057_000G1_scaffold_160_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1047..2477)
DNA (1431bp) protein (477aa)
Tissue alpha-L-fucosidase {ECO:0000313|EMBL:EXZ29119.1}; EC=3.2.1.51 {ECO:0000313|EMBL:EXZ29119.1};; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
Alpha-L-fucosidase n=5 Tax=Bacteroides fragilis RepID=Q64VK9_BACFR
alpha-L-fucosidase
L2_057_000G1_scaffold_160_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2722..4308)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8XET6_BACFG
putative outer membrane protein probably involved in nutrient binding
Putative outer membrane protein {ECO:0000313|EMBL:EYE52837.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L2_057_000G1_scaffold_160_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4362..7562)
DNA (3201bp) protein (1067aa)
SusC/RagA family TonB-linked outer membrane protein n=3 Tax=Bacteroides RepID=I8WZL5_BACFG
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:EXZ83694.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
putative outer membrane protein probably involved in nutrient binding
L2_057_000G1_scaffold_160_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7951..8397)
DNA (447bp) protein (149aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=E1WU93_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE45743.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L2_057_000G1_scaffold_160_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8412..9650)
DNA (1239bp) protein (413aa)
Major facilitator family transporter n=13 Tax=Bacteroides RepID=Q64VM1_BACFR
putative major facilitator superfamily transporter
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EXZ78981.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L2_057_000G1_scaffold_160_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9666..10850)
DNA (1185bp) protein (395aa)
Renin-binding protein-related protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64VM2_BACFR
renin-binding protein-related protein
Renin-binding protein-related protein {ECO:0000313|EMBL:BAD48454.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L2_057_000G1_scaffold_160_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10874..11791)
DNA (918bp) protein (306aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=C6I3E0_9BACE
putative N-acetylneuraminate lyase
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:EXY91190.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_057_000G1_scaffold_160_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12089..13297
DNA (1209bp) protein (403aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I3E1_9BACE
putative ROK family transcriptional repressor protein
Uncharacterized protein {ECO:0000313|EMBL:EKA84402.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L2_057_000G1_scaffold_160_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13294..13758)
DNA (465bp) protein (155aa)
Uncharacterized protein n=5 Tax=Bacteroides fragilis RepID=Q64VM5_BACFR
possible O-antigen related protein
Cupin fold metallo, WbuC family protein {ECO:0000313|EMBL:EXZ54404.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L2_057_000G1_scaffold_160_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13758..14288)
DNA (531bp) protein (177aa)
Putative LPS-related regulatory protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LEP1_BACFN
putative LPS-related regulatory protein
Transcription termination factor nusG family protein {ECO:0000313|EMBL:EXY91209.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_057_000G1_scaffold_160_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14264..15376)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=Q64VM7_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY97879.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_057_000G1_scaffold_160_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15382..17940)
DNA (2559bp) protein (853aa)
Polysaccharide biosynthesis/export protein n=2 Tax=Bacteroides RepID=D1JL04_9BACE
Polysaccharide biosynthesis/export family protein {ECO:0000313|EMBL:EXY41392.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
putative capsule polysaccharide export protein
L2_057_000G1_scaffold_160_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18055..19959)
DNA (1905bp) protein (635aa)
Capsular polysaccharide biosynthesis protein CapD n=5 Tax=Bacteroides RepID=Q64VM9_BACFR
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:EXZ54400.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
capsular polysaccharide biosynthesis protein CapD
L2_057_000G1_scaffold_160_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20551..20706)
DNA (156bp) protein (52aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I9RLH2_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY49363.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L2_057_000G1_scaffold_160_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20773..22335
DNA (1563bp) protein (521aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8XH20_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY49362.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
putative cell surface antigen
L2_057_000G1_scaffold_160_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22637..22783)
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I0PYW3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY66062.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
L2_057_000G1_scaffold_160_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22929..23807
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LNU6_9BACE
DNA/RNA non-specific endonuclease family protein {ECO:0000313|EMBL:EYE45729.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
putative endonuclease
L2_057_000G1_scaffold_160_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23965..25002
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64VN3_BACFR
hypothetical protein
YceG-like family protein {ECO:0000313|EMBL:EYE45728.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L2_057_000G1_scaffold_160_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25086..26678
DNA (1593bp) protein (531aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=8 Tax=Bacteroides RepID=C6I3F1_9BACE
putative indolepyruvate oxidoreductase/indolepyruvate ferredoxin oxidoreductase
L2_057_000G1_scaffold_160_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26682..27266
DNA (585bp) protein (195aa)
Indolepyruvate oxidoreductase subunit IorB n=14 Tax=Bacteroides RepID=Q64VN5_BACFR
putative indolepyruvate oxidoreductase subunit
Indolepyruvate oxidoreductase subunit IorB {ECO:0000313|EMBL:BAD48441.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L2_057_000G1_scaffold_160_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27371..28678
DNA (1308bp) protein (436aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
Phenylacetate-coenzyme A ligase n=11 Tax=Bacteroides RepID=Q64VN6_BACFR
phenylacetate-coenzyme A ligase
L2_057_000G1_scaffold_160_24
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28764..29333
DNA (570bp) protein (190aa)
putative xanthine phosphoribosyltransferase (EC:2.4.2.-)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
Xanthine phosphoribosyltransferase n=13 Tax=Bacteroides RepID=XPT_BACFN
L2_057_000G1_scaffold_160_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29408..30199)
DNA (792bp) protein (264aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=Q64VN8_BACFR
putative ferredoxin
4Fe-4S binding domain protein {ECO:0000313|EMBL:EXY91206.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_057_000G1_scaffold_160_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(30628..30978)
DNA (351bp) protein (117aa)
50S ribosomal protein L20 n=14 Tax=Bacteroides RepID=RL20_BACFN
rplT; putative 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
L2_057_000G1_scaffold_160_27
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(31079..31276)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=14 Tax=Bacteroides RepID=RL35_BACFN
rpmI; putative 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_057_000G1_scaffold_160_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31342..31995)
DNA (654bp) protein (218aa)
Translation initiation factor IF-3 n=2 Tax=Bacteroides fragilis RepID=I8WXK5_BACFG
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
infC; putative translation initiation factor IF-3
L2_057_000G1_scaffold_160_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32072..34012)
DNA (1941bp) protein (647aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
thrS; putative threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=14 Tax=Bacteroides RepID=SYT_BACFN
L2_057_000G1_scaffold_160_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34093..36141)
DNA (2049bp) protein (683aa)
Tetratricopeptide repeat protein n=11 Tax=Bacteroides RepID=D1JKY9_9BACE
TPR repeat family protein {ECO:0000313|EMBL:EYB09632.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
putative exported Tpr repeat-family protein
Displaying items 1-30 of 174 in total

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