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L2_057_000G1_scaffold_329

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000G1_scaffold_329_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(242..721)
DNA (480bp) protein (160aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
Ferritin n=15 Tax=Bacteroides RepID=FTN_BACF6
ftnA; ferritin A
L2_057_000G1_scaffold_329_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(859..2022)
DNA (1164bp) protein (388aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
Diaminopimelate decarboxylase n=9 Tax=Bacteroides RepID=E1WS51_BACF6
putative diaminopimelate decarboxylase
L2_057_000G1_scaffold_329_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2179..3498)
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
Aspartokinase n=14 Tax=Bacteroides RepID=E1WS52_BACF6
putative aspartokinase III
L2_057_000G1_scaffold_329_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3530..4228)
DNA (699bp) protein (233aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I9VA65_BACFG
ABC transporter family protein {ECO:0000313|EMBL:EYA18466.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
ftsE; Cell division ATP-binding protein
L2_057_000G1_scaffold_329_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4213..4824)
DNA (612bp) protein (204aa)
Histidine biosynthesis bifunctional protein HisIE n=16 Tax=Bacteroides RepID=E1WS54_BACF6
phosphoribosyl-ATP pyrophosphohydrolase
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L2_057_000G1_scaffold_329_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5013..5765)
DNA (753bp) protein (251aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
Imidazole glycerol phosphate synthase subunit HisF n=10 Tax=Bacteroides RepID=E1WS55_BACF6
hisF; imidazole glycerol phosphate synthase subunit
L2_057_000G1_scaffold_329_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5867..6586)
DNA (720bp) protein (240aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Bacteroides RepID=E1WS56_BACF6
hisA; imidazole-4-carboxamide isomerase
L2_057_000G1_scaffold_329_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6626..7216)
DNA (591bp) protein (197aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
Imidazole glycerol phosphate synthase subunit HisH n=6 Tax=Bacteroides RepID=HIS5_BACFR
hisH; imidazole glycerol phosphate synthase subunit
L2_057_000G1_scaffold_329_9
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7987..9216
DNA (1230bp) protein (410aa)
Site-specific recombinase phage integrase family n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KLY7_9BACE
tyrosine type site-specific recombinase
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDE75972.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
L2_057_000G1_scaffold_329_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9433..9726)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I6C4_9BACE
MerR HTH regulatory family protein {ECO:0000313|EMBL:EXZ05680.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
possible DNA-binding protein
L2_057_000G1_scaffold_329_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9762..10052)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I6C5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXZ05689.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
hypothetical protein
L2_057_000G1_scaffold_329_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10067..10357)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I6C6_9BACE
MerR HTH regulatory family protein {ECO:0000313|EMBL:EXY70275.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
hypothetical protein
L2_057_000G1_scaffold_329_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10354..10656)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BDE5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95549.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
conserved hypothetical protein found in conjugate transposon
L2_057_000G1_scaffold_329_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11137..11586
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3R1H3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXZ05691.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
hypothetical protein
L2_057_000G1_scaffold_329_15
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11867..12364
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI000370DF63
Uncharacterized protein {ECO:0000313|EMBL:CCZ82285.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
L2_057_000G1_scaffold_329_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12481..12804)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I6D0_9BACE
Helix-turn-helix domain protein {ECO:0000313|EMBL:EXZ03129.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
hypothetical protein
L2_057_000G1_scaffold_329_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12934..13311)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZJN2_9PORP
RteC family protein {ECO:0000313|EMBL:EXZ78270.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
hypothetical protein
L2_057_000G1_scaffold_329_18
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13304..13543)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I6D2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY56431.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
hypothetical protein
L2_057_000G1_scaffold_329_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13561..14442)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I6D3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY70276.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
hypothetical protein
L2_057_000G1_scaffold_329_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14519..15088)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I6D4_9BACE
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EXZ78272.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
cAMP-binding domain-containing regulatory protein
L2_057_000G1_scaffold_329_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15644..16171)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M535_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EYA39719.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
hypothetical protein
L2_057_000G1_scaffold_329_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16676..19078)
DNA (2403bp) protein (801aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4VY79_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EYA39718.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
Protein of unknown function DUF262
L2_057_000G1_scaffold_329_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19071..21113)
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4VY80_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXY40244.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
hypothetical protein
L2_057_000G1_scaffold_329_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21429..22343
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4VY81_BACFG
Putative exonuclease I {ECO:0000313|EMBL:EXY40214.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
hypothetical protein
L2_057_000G1_scaffold_329_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22936..23343)
DNA (408bp) protein (136aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=E1WS60_BACF6
hypothetical protein
Putative general stress protein {ECO:0000313|EMBL:EYE46565.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L2_057_000G1_scaffold_329_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23554..24375)
DNA (822bp) protein (274aa)
Transcriptional regulator n=10 Tax=Bacteroides RepID=Q64RS5_BACFR
putative regulatory protein
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EXZ43734.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L2_057_000G1_scaffold_329_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24418..24783)
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8X375_BACFG
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein {ECO:0000313|EMBL:EXZ82467.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
hypothetical protein
L2_057_000G1_scaffold_329_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24889..25695)
DNA (807bp) protein (269aa)
Transcriptional regulator, AraC family n=5 Tax=Bacteroides RepID=D1JTD7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY90872.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative regulatory protein
L2_057_000G1_scaffold_329_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26080..29841)
DNA (3762bp) protein (1254aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64RS2_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD49809.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L2_057_000G1_scaffold_329_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29866..32445)
DNA (2580bp) protein (860aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HLN9_BACFG
Glycosyl hydrolase family 3 C-terminal domain protein {ECO:0000313|EMBL:EYB08848.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
periplasmic beta-glucosidase precursor
Displaying items 1-30 of 72 in total

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