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L2_057_000G1_scaffold_481

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000G1_scaffold_481_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(116..979)
DNA (864bp) protein (288aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
aroE; shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=3 Tax=Clostridium symbiosum RepID=E7GRV5_CLOSY
L2_057_000G1_scaffold_481_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1004..1810)
DNA (807bp) protein (269aa)
AP endonuclease, family 2 n=2 Tax=Clostridium symbiosum RepID=E9SSM7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92545.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_057_000G1_scaffold_481_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2165..3088
DNA (924bp) protein (308aa)
mvaB; hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4)
Hydroxymethylglutaryl-CoA lyase n=2 Tax=Clostridium symbiosum RepID=E7GRV3_CLOSY
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:EGA92544.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_057_000G1_scaffold_481_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3412..4269)
DNA (858bp) protein (286aa)
prpB; carboxyvinyl-carboxyphosphonate phosphorylmutase (EC:4.1.3.30)
Carboxyvinyl-carboxyphosphonate phosphorylmutase n=2 Tax=Clostridium symbiosum RepID=E7GRV2_CLOSY
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:EGA92543.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_057_000G1_scaffold_481_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4702..6036
DNA (1335bp) protein (445aa)
Glutamate dehydrogenase n=2 Tax=Clostridium symbiosum RepID=E7GRV1_CLOSY
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Glu/Leu/Phe/Val dehydrogenase
L2_057_000G1_scaffold_481_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6130..7026)
DNA (897bp) protein (299aa)
AraC-family transcriptional regulator n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GRV0_CLOSY
AraC-family transcriptional regulator {ECO:0000313|EMBL:EGA92541.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
AraC family transcriptional regulator
L2_057_000G1_scaffold_481_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7090..8664)
DNA (1575bp) protein (525aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FIP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03731.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
sodium/hydrogen exchanger
L2_057_000G1_scaffold_481_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8801..11743)
DNA (2943bp) protein (981aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FIP4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03730.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative signaling protein
L2_057_000G1_scaffold_481_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11945..12439
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GRU7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92538.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_057_000G1_scaffold_481_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12548..13888)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=U2D924_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03728.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Protein of unknown function (DUF1576).
L2_057_000G1_scaffold_481_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14005..15351)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSN6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03727.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hemolysin
L2_057_000G1_scaffold_481_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15787..17061)
DNA (1275bp) protein (425aa)
UPF0597 protein HMPREF1020_04336 n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FIP0_9CLOT
UPF0597 protein HMPREF1020_04336 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_057_000G1_scaffold_481_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17083..18012)
DNA (930bp) protein (310aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase n=2 Tax=Clostridium RepID=E7GRU3_CLOSY
L2_057_000G1_scaffold_481_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18034..19398)
DNA (1365bp) protein (455aa)
Nitrite and sulphite reductase 4Fe-4S region n=2 Tax=Clostridium symbiosum RepID=E7GRU2_CLOSY
Nitrite and sulphite reductase 4Fe-4S region {ECO:0000313|EMBL:EGA92533.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
C_GCAxxG_C_C family probable redox protein
L2_057_000G1_scaffold_481_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19552..20091)
DNA (540bp) protein (180aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=4 Tax=Clostridium RepID=E7GRU1_CLOSY
L2_057_000G1_scaffold_481_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20081..20731)
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GRU0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92531.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L2_057_000G1_scaffold_481_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20872..21987)
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FIN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03721.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
4-hydroxybutyrate dehydrogenase
L2_057_000G1_scaffold_481_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21984..23195)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SSP3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI76025.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L2_057_000G1_scaffold_481_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23217..24272)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSP4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92527.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
uroporphyrinogen decarboxylase
L2_057_000G1_scaffold_481_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24335..25345
DNA (1011bp) protein (337aa)
Transcriptional regulator, LysR family n=2 Tax=Clostridium RepID=U2D3F2_CLOSY
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ERI76027.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
LysR family transcriptional regulator
L2_057_000G1_scaffold_481_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25502..27169)
DNA (1668bp) protein (556aa)
Inorganic pyrophosphatase/exopolyphosphatase (EC:3.6.1.1)
DRTGG domain protein n=3 Tax=Clostridium RepID=E9SSP6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92525.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_057_000G1_scaffold_481_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27557..32332)
DNA (4776bp) protein (1592aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FIM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03715.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_057_000G1_scaffold_481_23
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32663..34252)
DNA (1590bp) protein (530aa)
Amidohydrolase family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SSP8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03714.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative amidohydrolase
L2_057_000G1_scaffold_481_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34445..35389)
DNA (945bp) protein (315aa)
glucokinase (EC:2.7.1.2)
ROK family protein n=4 Tax=Clostridium RepID=E9SSP9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92522.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_057_000G1_scaffold_481_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35538..37529)
DNA (1992bp) protein (664aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
transketolase (EC:2.2.1.1)
Transketolase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GRT0_CLOSY
L2_057_000G1_scaffold_481_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37549..38820)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=U2BUV7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92520.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_057_000G1_scaffold_481_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38949..40472)
DNA (1524bp) protein (508aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FIM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03710.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_057_000G1_scaffold_481_28
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40538..41137)
DNA (600bp) protein (200aa)
Sporulation protein YyaC n=4 Tax=Clostridium RepID=E7GRS7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03709.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
putative sporulation protein YyaC
L2_057_000G1_scaffold_481_29
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41219..42319)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U2BD17_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03708.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_057_000G1_scaffold_481_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42349..43584)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=3 Tax=Clostridium symbiosum RepID=U2BUW1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI76040.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
Displaying 30 items

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