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L2_057_000G1_scaffold_563

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000G1_scaffold_563_1
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(104..976)
DNA (873bp) protein (291aa)
Uncharacterized protein n=19 Tax=Staphylococcus epidermidis RepID=Q8CSQ5_STAES
nuclease-related domain protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ13872.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_057_000G1_scaffold_563_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1303..1902
DNA (600bp) protein (200aa)
Uncharacterized protein n=41 Tax=Staphylococcus epidermidis RepID=Q8CSQ4_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59380.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_563_3
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1980..3356)
DNA (1377bp) protein (459aa)
aspartate kinase domain protein (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Aspartokinase n=9 Tax=Staphylococcus RepID=C5Q8W7_STAEP
L2_057_000G1_scaffold_563_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3545..4825
DNA (1281bp) protein (427aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Homoserine dehydrogenase n=18 Tax=Staphylococcus RepID=Q8CPD4_STAES
homoserine dehydrogenase, NAD binding domain protein
L2_057_000G1_scaffold_563_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4831..5895
DNA (1065bp) protein (355aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Threonine synthase n=23 Tax=Staphylococcus RepID=Q8CPD3_STAES
L2_057_000G1_scaffold_563_6
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5897..6817
DNA (921bp) protein (307aa)
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Homoserine kinase n=8 Tax=Staphylococcus epidermidis RepID=C5Q8X0_STAEP
L2_057_000G1_scaffold_563_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6880..7686
DNA (807bp) protein (269aa)
Hydrolase, haloacid dehalogenase-like family n=48 Tax=Staphylococcus epidermidis RepID=Q5HPL1_STAEQ
Hydrolase (HAD superfamily)
Cof-like hydrolase {ECO:0000313|EMBL:EFE59375.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_563_8
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7993..8226)
DNA (234bp) protein (78aa)
Staphylococcus haemolyticus JCSC1435 DNA, complete genome n=1 Tax=Staphylococcus haemolyticus (strain JCSC1435) RepID=Q4L641_STAHJ
hypothetical protein
Putative N-acetyltransferase YedL {ECO:0000313|EMBL:KDP49498.1}; TaxID=904802 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CO-98.;"
L2_057_000G1_scaffold_563_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8532..9980)
DNA (1449bp) protein (483aa)
Amino acid permease n=2 Tax=Staphylococcus epidermidis RepID=C5Q8X3_STAEP
amino acid permease
Amino acid permease family protein {ECO:0000313|EMBL:AAW54262.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_563_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10211..11725
DNA (1515bp) protein (505aa)
Catalase; EC=1.11.1.6;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Catalase (EC:1.11.1.6)
Catalase n=8 Tax=Staphylococcus epidermidis RepID=C5Q8X4_STAEP
L2_057_000G1_scaffold_563_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


11815..11964
DNA (150bp) protein (50aa)
50S ribosomal protein L33 2 n=89 Tax=Staphylococcus RepID=RL332_STAEQ
LSU ribosomal protein L33p
50S ribosomal protein L33 2; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L2_057_000G1_scaffold_563_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


12130..12399
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=81 Tax=Staphylococcus epidermidis RepID=RS14_STAEQ
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000255|HAMAP-Rule:MF_00537}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L2_057_000G1_scaffold_563_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12553..13530
DNA (978bp) protein (326aa)
GMP reductase (EC:1.7.1.7)
GMP reductase {ECO:0000256|HAMAP-Rule:MF_01511, ECO:0000256|SAAS:SAAS00082324}; EC=1.7.1.7 {ECO:0000256|HAMAP-Rule:MF_01511, ECO:0000256|SAAS:SAAS00043008};; Guanosine 5'-monophosphate oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01511}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
GMP reductase n=46 Tax=Staphylococcus epidermidis RepID=GUAC_STAEQ
L2_057_000G1_scaffold_563_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13628..14569
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Staphylococcus epidermidis RepID=J1BVL2_STAEP
hypothetical protein
SCP-like protein {ECO:0000313|EMBL:EFE59368.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_563_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14624..14758
DNA (135bp) protein (45aa)
Uncharacterized protein n=14 Tax=Staphylococcus epidermidis RepID=D1WNT5_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EFE59367.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_563_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14922..15542)
DNA (621bp) protein (207aa)
SOS-response repressor and protease LexA (EC:3.4.21.88)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
LexA repressor n=54 Tax=Staphylococcus epidermidis RepID=LEXA_STAEQ
L2_057_000G1_scaffold_563_17

Not on your lists

15686..15919
DNA (234bp) protein (78aa)
Uncharacterized protein n=40 Tax=Staphylococcus epidermidis RepID=Q8CSP5_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ19917.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_057_000G1_scaffold_563_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16080..16316
DNA (237bp) protein (79aa)
UPF0291 protein SE_1024 n=44 Tax=Staphylococcus epidermidis RepID=Y1024_STAES
hypothetical protein
UPF0291 protein HMPREF0794_0651 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_563_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16548..18536
DNA (1989bp) protein (663aa)
Transketolase; Short=TK;; EC=2.2.1.1;; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Transketolase (EC:2.2.1.1)
Transketolase n=25 Tax=Staphylococcus epidermidis RepID=TKT_STAES
L2_057_000G1_scaffold_563_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18743..18970
DNA (228bp) protein (76aa)
UPF0154 protein SE_1026 n=83 Tax=Staphylococcus epidermidis RepID=Y1026_STAES
hypothetical protein
UPF0154 protein HMPREF0794_0649 {ECO:0000256|HAMAP-Rule:MF_00363}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_563_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19181..19669
DNA (489bp) protein (163aa)
Uncharacterized protein n=10 Tax=Staphylococcus epidermidis RepID=Q8CSP2_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59361.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_563_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19777..20901
DNA (1125bp) protein (375aa)
Nuclease SbcCD subunit D n=39 Tax=Staphylococcus epidermidis RepID=SBCD_STAEQ
exonuclease SbcD
Nuclease SbcCD subunit D; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_563_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20905..23934
DNA (3030bp) protein (1010aa)
Nuclease SbcCD subunit C n=27 Tax=Staphylococcus epidermidis RepID=SBCC_STAEQ
Nuclease SbcCD subunit C; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Exonuclease SbcC
L2_057_000G1_scaffold_563_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24052..24447)
DNA (396bp) protein (132aa)
Large-conductance mechanosensitive channel n=13 Tax=Staphylococcaceae RepID=V4QSB8_STAEP
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Large-conductance mechanosensitive channel
L2_057_000G1_scaffold_563_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24614..26254
DNA (1641bp) protein (547aa)
Choline/carnitine/betaine transporter n=47 Tax=Staphylococcus epidermidis RepID=Q5HPJ1_STAEQ
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:AAW54295.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
choline/carnitine/betaine transporter
L2_057_000G1_scaffold_563_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26675..29380
DNA (2706bp) protein (902aa)
acnA; aconitate hydratase 1 (EC:4.2.1.3)
Aconitate hydratase A {ECO:0000250|UniProtKB:Q8ZP52}; Short=ACN {ECO:0000250|UniProtKB:Q8ZP52};; Short=Aconitase {ECO:0000250|UniProtKB:Q8ZP52};; EC=4.2.1.3 {ECO:0000250|UniProtKB:Q8ZP52};; (2R,3S)-2-methylisocitrate dehydratase {ECO:0000250|UniProtKB:Q8ZP52}; (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate dehydratase {ECO:0000250|UniProtKB:Q8ZP52}; Iron-responsive protein-like {ECO:0000250|UniProtKB:P09339}; Short=IRP-like {ECO:0000250|UniProtKB:P09339};; Probable 2-methyl-cis-aconitate hydratase {ECO:0000250|UniProtKB:Q8ZP52}; EC=4.2.1.99 {ECO:0000250|UniProtKB:Q8ZP52};; RNA-binding protein {ECO:0000250|UniProtKB:P09339}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Aconitate hydratase n=29 Tax=Staphylococcus epidermidis RepID=ACON_STAES
L2_057_000G1_scaffold_563_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29503..29970
DNA (468bp) protein (156aa)
Thioesterase family protein n=44 Tax=Staphylococcus epidermidis RepID=Q5HPI9_STAEQ
thioesterase
Thioesterase family protein {ECO:0000313|EMBL:AAW54304.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_563_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30021..30317)
DNA (297bp) protein (99aa)
Uncharacterized protein SE_1034 n=49 Tax=Staphylococcus epidermidis RepID=Y1034_STAES
hypothetical protein
Uncharacterized protein SERP0923; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_563_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30561..31169)
DNA (609bp) protein (203aa)
Glycerol-3-phosphate acyltransferase n=66 Tax=Staphylococcus epidermidis RepID=PLSY_STAEQ
plsY; acyl-phosphate glycerol 3-phosphate acyltransferase
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_057_000G1_scaffold_563_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31379..33373
DNA (1995bp) protein (665aa)
Topoisomerase IV subunit B (EC:5.99.1.-)
DNA topoisomerase 4 subunit B {ECO:0000255|HAMAP-Rule:MF_00939}; EC=5.99.1.3 {ECO:0000255|HAMAP-Rule:MF_00939};; Topoisomerase IV subunit B {ECO:0000255|HAMAP-Rule:MF_00939}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
DNA topoisomerase 4 subunit B n=9 Tax=Staphylococcus epidermidis RepID=D1WNR7_STAEP
Displaying items 1-30 of 37 in total

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