ggKbase home page

L2_057_000G1_scaffold_571

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000G1_scaffold_571_1
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

468..2102
DNA (1635bp) protein (545aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI86116.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
L2_057_000G1_scaffold_571_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(2392..2628)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N7V6_CORGP
Uncharacterized protein {ECO:0000313|EMBL:KGI74860.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_057_000G1_scaffold_571_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2766..3722
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAI8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74859.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_057_000G1_scaffold_571_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3833..5014)
DNA (1182bp) protein (394aa)
Cation diffusion facilitator family transporter n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI40_9ACTN
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CDA36264.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
cation diffusion facilitator family transporter
L2_057_000G1_scaffold_571_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5275..6612
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAJ0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39513.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_057_000G1_scaffold_571_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6971..7759)
DNA (789bp) protein (263aa)
ADP-ribosylglycohydrolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAJ1_9ACTN
ADP-ribosylglycohydrolase {ECO:0000313|EMBL:EBA39514.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ribosylglycohydrolase
L2_057_000G1_scaffold_571_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7823..8878)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAJ2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39515.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_057_000G1_scaffold_571_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9121..9309
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPE9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36261.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L2_057_000G1_scaffold_571_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9402..11867)
DNA (2466bp) protein (822aa)
Phosphatidylinositol-specific phospholipase C X domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI35_9ACTN
Phosphatidylinositol-specific phospholipase C X domain protein {ECO:0000313|EMBL:CDA36259.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Phosphatidylinositol-specific phospholipase C, X domain.
L2_057_000G1_scaffold_571_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12173..12766)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z988_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74849.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_057_000G1_scaffold_571_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12993..13598)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAJ8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74848.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_057_000G1_scaffold_571_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13976..14608
DNA (633bp) protein (211aa)
Formiminotransferase-cyclodeaminase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A549_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74847.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
methenyl tetrahydrofolate cyclohydrolase
L2_057_000G1_scaffold_571_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14611..15465
DNA (855bp) protein (285aa)
Bifunctional protein FolD n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAK0_9ACTN
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+)
L2_057_000G1_scaffold_571_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15567..17090
DNA (1524bp) protein (508aa)
Peptidase, C69 family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAK2_9ACTN
Peptidase, C69 family {ECO:0000313|EMBL:EBA39525.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
dipeptidase A
L2_057_000G1_scaffold_571_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17190..17606
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAK3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39526.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_057_000G1_scaffold_571_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17615..19378
DNA (1764bp) protein (588aa)
ABC1 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAK4_9ACTN
ABC1 family protein {ECO:0000313|EMBL:EBA39527.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L2_057_000G1_scaffold_571_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19816..23592
DNA (3777bp) protein (1259aa)
Repeat protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A543_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75033.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L2_057_000G1_scaffold_571_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23602..24504
DNA (903bp) protein (301aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPE1_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDA36251.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_057_000G1_scaffold_571_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24665..25072)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5ZBJ3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36250.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_057_000G1_scaffold_571_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25292..25663)
DNA (372bp) protein (124aa)
GtrA-like protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI27_9ACTN
GtrA-like protein {ECO:0000313|EMBL:CDA36249.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L2_057_000G1_scaffold_571_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25766..27682)
DNA (1917bp) protein (639aa)
Fructose-bisphosphatase {ECO:0000256|SAAS:SAAS00065010}; EC=3.1.3.11 {ECO:0000256|SAAS:SAAS00065010};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
fructose-bisphosphatase (EC:3.1.3.11)
Fructose-1 6-bisphosphatase class 3 n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z981_9ACTN
L2_057_000G1_scaffold_571_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28003..28893
DNA (891bp) protein (297aa)
EDD domain protein DegV family n=1 Tax=Collinsella sp. CAG:166 RepID=R6A538_9ACTN
EDD domain protein DegV family {ECO:0000313|EMBL:CDA36247.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
degV family protein
L2_057_000G1_scaffold_571_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28974..30065)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAL3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39536.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
dioxygenase-like 2-nitropropane dioxygenase
L2_057_000G1_scaffold_571_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30257..30427
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAL4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39537.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L2_057_000G1_scaffold_571_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30452..31555)
DNA (1104bp) protein (368aa)
NOL1/NOP2/sun family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI22_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75024.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Fmu (Sun) domain-containing protein
L2_057_000G1_scaffold_571_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(31615..33765)
DNA (2151bp) protein (717aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
tRNA ligases class I (M) n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z976_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75023.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_057_000G1_scaffold_571_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33898..34464
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAL8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39541.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_057_000G1_scaffold_571_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34475..35050
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAL9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39542.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L2_057_000G1_scaffold_571_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35121..36332
DNA (1212bp) protein (404aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAM0_9ACTN
S-adenosylmethionine--tRNA ribosyltransferase-isomerase
Displaying 29 items

View Taxonomy