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L2_057_000G1_scaffold_592

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000G1_scaffold_592_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..570)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32800.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative metalloendopeptidase
L2_057_000G1_scaffold_592_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(595..1485)
DNA (891bp) protein (297aa)
Cell division protein FtsX n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CXE0_9CLOT
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ftsX; cell division protein FtsX
L2_057_000G1_scaffold_592_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1469..2161)
DNA (693bp) protein (231aa)
Cell division ATP-binding protein FtsE n=3 Tax=Clostridiales RepID=H1CF63_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EHO32802.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ftsE; cell division protein FtsE
L2_057_000G1_scaffold_592_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2247..3338)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=U2BJF5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32803.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_057_000G1_scaffold_592_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3608..4312)
DNA (705bp) protein (235aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rsuA; pseudouridine synthase RsuA (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF65_9FIRM
L2_057_000G1_scaffold_592_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4416..4892
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B1B5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71959.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_057_000G1_scaffold_592_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4932..5456)
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32806.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein predicted by Glimmer/Critica
L2_057_000G1_scaffold_592_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5453..6322)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32807.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative mechanosensitive ion channelprotein,MscS family
L2_057_000G1_scaffold_592_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6631..7830)
DNA (1200bp) protein (400aa)
Elongation factor Tu n=3 Tax=Clostridiales RepID=G9YXJ9_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
tuf; elongation factor Tu
L2_057_000G1_scaffold_592_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7957..10062)
DNA (2106bp) protein (702aa)
Elongation factor G n=3 Tax=Clostridiales RepID=G9YXK0_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
fusA; elongation factor G
L2_057_000G1_scaffold_592_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10077..10547)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF71_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ribosomal protein S7
L2_057_000G1_scaffold_592_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10756..11178)
DNA (423bp) protein (141aa)
30S ribosomal protein S12 n=3 Tax=Clostridiales RepID=G9YXK2_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rpsL; 30S ribosomal protein S12
L2_057_000G1_scaffold_592_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11253..11495)
DNA (243bp) protein (81aa)
50S ribosomal protein L7Ae family protein n=3 Tax=Clostridiales RepID=G9YXK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54568.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
50S ribosomal protein L7
L2_057_000G1_scaffold_592_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11720..13054)
DNA (1335bp) protein (445aa)
Branched-chain amino acid transport system II carrier protein n=2 Tax=Clostridiales RepID=G9YXK5_9FIRM
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EHO32813.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
branched-chain amino acid ABC transporter substrate-binding protein
L2_057_000G1_scaffold_592_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13105..14697)
DNA (1593bp) protein (531aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54566.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Predicted metal-dependent hydrolase with the TIM-barrel fold
L2_057_000G1_scaffold_592_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14863..16215)
DNA (1353bp) protein (451aa)
Putative arginine utilization regulatory protein RocR n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXK7_9FIRM
Putative arginine utilization regulatory protein RocR {ECO:0000313|EMBL:EHM37246.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ATPase AAA
L2_057_000G1_scaffold_592_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16555..20262
DNA (3708bp) protein (1236aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rpoB; DNA-directed RNA polymerase beta chain (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXK8_9FIRM
L2_057_000G1_scaffold_592_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20285..24058
DNA (3774bp) protein (1258aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rpoC; DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF79_9FIRM
L2_057_000G1_scaffold_592_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24121..25458
DNA (1338bp) protein (446aa)
Putative type IV conjugative transfer system protein TraL n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXL0_9FIRM
Putative type IV conjugative transfer system protein TraL {ECO:0000313|EMBL:EHM37249.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_057_000G1_scaffold_592_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25598..25888
DNA (291bp) protein (97aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YXL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54560.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_057_000G1_scaffold_592_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25963..26880
DNA (918bp) protein (306aa)
NlpC/P60 family protein n=2 Tax=Clostridiales RepID=U2AX90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54559.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
NLP/P60 protein
L2_057_000G1_scaffold_592_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27310..27726)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2AV95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32822.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_057_000G1_scaffold_592_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27942..28442
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YXL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32823.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_057_000G1_scaffold_592_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28439..29047
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YXL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI64032.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_057_000G1_scaffold_592_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29044..29925)
DNA (882bp) protein (294aa)
Radical SAM domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXL6_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EHM37255.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
radical SAM protein
L2_057_000G1_scaffold_592_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29988..31205
DNA (1218bp) protein (406aa)
Putative proton/sodium-glutamate symport protein GltT n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXL7_9FIRM
Putative proton/sodium-glutamate symport protein GltT {ECO:0000313|EMBL:EHM37256.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
sodium:dicarboxylate symporter
L2_057_000G1_scaffold_592_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31219..33024)
DNA (1806bp) protein (602aa)
Copper amine oxidase domain protein n=2 Tax=Clostridiales RepID=G9YXL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32827.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_057_000G1_scaffold_592_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33027..34055)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32828.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_057_000G1_scaffold_592_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34092..34502)
DNA (411bp) protein (137aa)
GtrA-like protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C423_9CLOT
GtrA-like protein {ECO:0000313|EMBL:ERI64037.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Predicted membrane protein
L2_057_000G1_scaffold_592_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34483..35112)
DNA (630bp) protein (210aa)
Putative bactoprenol glucosyl transferase-like protein n=2 Tax=Clostridiales RepID=G9YXM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54550.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
glycosyl transferase 2
Displaying 30 items

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