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L2_057_000G1_scaffold_720

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000G1_scaffold_720_1
unknown

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comp(3..68)
DNA (66bp) protein (22aa)

This feature has no annotations

L2_057_000G1_scaffold_720_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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158..313
DNA (156bp) protein (52aa)
IS1272-like transposase, degenerate n=27 Tax=Staphylococcus epidermidis RepID=Q5HN79_STAEQ
truncated IS1272 transposase
IS1272, transposase {ECO:0000313|EMBL:EFE60047.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_720_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

523..1653
DNA (1131bp) protein (377aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Epoxyqueuosine reductase n=48 Tax=Staphylococcus epidermidis RepID=Q8CRX0_STAES
Iron-sulfur cluster-binding protein
L2_057_000G1_scaffold_720_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1650..2120
DNA (471bp) protein (157aa)
tRNA (cytosine34-2'-O-)-methyltransferase (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
RNA methyltransferase n=51 Tax=Staphylococcus epidermidis RepID=V6QAY7_STAEP
L2_057_000G1_scaffold_720_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2278..2877
DNA (600bp) protein (200aa)
Glucosamine-6-phosphate isomerase family protein n=7 Tax=Staphylococcus epidermidis RepID=C5QA53_STAEP
glucosamine-6-phosphate isomerase family protein
Glucosamine-6-phosphate isomerase family protein {ECO:0000313|EMBL:AAW54725.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_720_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2898..3080
DNA (183bp) protein (61aa)
Uncharacterized protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HN83_STAEQ
Hypothetical protein SAV1853
Uncharacterized protein {ECO:0000313|EMBL:EFE60051.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_720_7
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3236..3640
DNA (405bp) protein (135aa)
Uncharacterized protein n=38 Tax=Staphylococcus epidermidis RepID=Q5HN84_STAEQ
Hypothetical protein SAV1852
Uncharacterized protein {ECO:0000313|EMBL:ETJ14709.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_057_000G1_scaffold_720_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3825..5210
DNA (1386bp) protein (462aa)
fumC; fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Fumarate hydratase class II n=49 Tax=Staphylococcus epidermidis RepID=FUMC_STAEQ
L2_057_000G1_scaffold_720_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5571..6395)
DNA (825bp) protein (275aa)
Ribosomal large subunit pseudouridine synthase, RluD subfamily n=45 Tax=Staphylococcus epidermidis RepID=Q5HN86_STAEQ
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type
Ribosomal large subunit pseudouridine synthase, RluD subfamily {ECO:0000313|EMBL:AAW54714.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_720_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6554..7687
DNA (1134bp) protein (378aa)
Nitrate/nitrite sensor protein (EC:2.7.3.-)
Two-component sensor histidine kinase-like protein n=48 Tax=Staphylococcus epidermidis RepID=Q8CRX7_STAES
Histidine kinase {ECO:0000313|EMBL:EFE60055.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_720_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7680..8303
DNA (624bp) protein (208aa)
DNA-binding response regulator, LuxR family n=77 Tax=Staphylococcus epidermidis RepID=Q5HN88_STAEQ
Two-component response regulator-like protein
LuxR family transcriptional regulator {ECO:0000313|EMBL:ESV18735.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_057_000G1_scaffold_720_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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8574..9038
DNA (465bp) protein (155aa)
Transcriptional regulator, Cro/CI family n=79 Tax=Staphylococcus epidermidis RepID=Q5HN89_STAEQ
HTH domain protein SA1665, binds to mecA promoter region
Transcriptional regulator, Cro/CI family {ECO:0000313|EMBL:EES35839.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_057_000G1_scaffold_720_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9217..10350
DNA (1134bp) protein (378aa)
Uncharacterized protein n=39 Tax=Staphylococcus epidermidis RepID=C5QA45_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE60058.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_720_14

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10423..10767
DNA (345bp) protein (115aa)
UPF0342 protein SERP1381 n=78 Tax=Staphylococcus epidermidis RepID=Y1381_STAEQ
putative transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:ETJ20097.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_057_000G1_scaffold_720_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11038..12234
DNA (1197bp) protein (399aa)
DNA repair exonuclease family protein n=45 Tax=Staphylococcus epidermidis RepID=Q5HN92_STAEQ
DNA repair exonuclease
DNA repair exonuclease family protein {ECO:0000313|EMBL:AAW54765.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_720_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12224..15163
DNA (2940bp) protein (980aa)
Uncharacterized protein n=9 Tax=Staphylococcus epidermidis RepID=C5QA42_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EFE60061.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
DNA double-strand break repair rad50 ATPase
L2_057_000G1_scaffold_720_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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15160..16101
DNA (942bp) protein (314aa)
HD domain protein n=6 Tax=Staphylococcus epidermidis RepID=C5QA41_STAEP
CMP-binding-factor 1
Cmp-binding-factor 1 {ECO:0000313|EMBL:AAW54763.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_720_18

Not on your lists

comp(16527..17504)
DNA (978bp) protein (326aa)
Foldase protein PrsA precursor (EC:5.2.1.8)
Foldase protein PrsA n=11 Tax=Staphylococcus epidermidis RepID=D1WMI3_STAEP
Foldase protein prsA {ECO:0000313|EMBL:ETJ20093.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_057_000G1_scaffold_720_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17706..18266)
DNA (561bp) protein (187aa)
Uncharacterized protein n=54 Tax=Staphylococcus epidermidis RepID=Q5HN97_STAEQ
Hypothetical protein SAV1840
Uncharacterized protein {ECO:0000313|EMBL:AAW54760.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_720_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18432..18803)
DNA (372bp) protein (124aa)
Uncharacterized protein n=15 Tax=Staphylococcus epidermidis RepID=Q8CRY5_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE60065.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_720_21

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comp(18880..19305)
DNA (426bp) protein (142aa)
Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC:3.6.1.17)
HIT family protein n=52 Tax=Staphylococcus epidermidis RepID=Q5HN99_STAEQ
HIT histidine triad cell-cycle regulator {ECO:0000313|EMBL:ETJ20090.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_057_000G1_scaffold_720_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19435..20175
DNA (741bp) protein (247aa)
ABC transporter ecsA-like protein n=51 Tax=Staphylococcus epidermidis RepID=Q8CNR6_STAES
ABC transporter ecsA
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE60067.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_720_23

Not on your lists

20144..21391
DNA (1248bp) protein (416aa)
Bacterial ABC transporter protein EcsB n=6 Tax=Staphylococcus epidermidis RepID=C5QA34_STAEP
ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ETJ20088.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ABC transporter ecsB
L2_057_000G1_scaffold_720_24

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21450..22067
DNA (618bp) protein (206aa)
Cadmium resistance family protein n=47 Tax=Staphylococcus epidermidis RepID=Q5HNA2_STAEQ
Cadmium resistance protein
Cadmium resistance transporter family protein {ECO:0000313|EMBL:ETJ20087.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_057_000G1_scaffold_720_25

Not on your lists

comp(22630..23133)
DNA (504bp) protein (168aa)
Signal transduction protein TRAP n=29 Tax=Staphylococcus epidermidis RepID=TRAP_STAEQ
Uncharacterized protein, homolog of B.subtilis yhgC
Signal transduction protein TRAP {ECO:0000313|EMBL:ETJ20086.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_057_000G1_scaffold_720_26

Not on your lists

23408..24487
DNA (1080bp) protein (360aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=3 Tax=Staphylococcus epidermidis RepID=V6QAM8_STAEP
Uroporphyrinogen decarboxylase {ECO:0000313|EMBL:ETJ20085.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_057_000G1_scaffold_720_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24563..25486
DNA (924bp) protein (308aa)
hemH; ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Ferrochelatase n=44 Tax=Staphylococcus epidermidis RepID=HEMH_STAEQ
L2_057_000G1_scaffold_720_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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25579..27027
DNA (1449bp) protein (483aa)
hemG; protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen oxidase {ECO:0000313|EMBL:AAW54736.1}; EC=1.3.3.4 {ECO:0000313|EMBL:AAW54736.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Protoporphyrinogen oxidase n=2 Tax=Staphylococcus epidermidis RepID=C5QA30_STAEP
L2_057_000G1_scaffold_720_29

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27163..27717
DNA (555bp) protein (185aa)
Uncharacterized protein n=37 Tax=Staphylococcus epidermidis RepID=Q5HNA7_STAEQ
serine hydrolase family protein
Putative esterase {ECO:0000313|EMBL:ETJ20082.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_057_000G1_scaffold_720_30
Staphylococcus pasteuri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(29174..29746)
DNA (573bp) protein (191aa)
Uncharacterized protein n=6 Tax=Staphylococcus epidermidis RepID=C5QA28_STAEP
putative lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:AGZ24992.1}; TaxID=1276282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus pasteuri SP1.;"
Displaying items 1-30 of 41 in total

View Taxonomy