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L2_057_000G1_scaffold_743

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000G1_scaffold_743_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2..976)
DNA (975bp) protein (325aa)
LPXTG-motif cell wall anchor domain protein n=23 Tax=Staphylococcus epidermidis RepID=C5Q6B7_STAEP
hypothetical protein
Cell wall surface anchor family protein {ECO:0000313|EMBL:AAW54808.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_743_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1316..2935)
DNA (1620bp) protein (540aa)
60 kDa chaperonin n=53 Tax=Staphylococcus RepID=CH60_STAEQ
60 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000255|HAMAP-Rule:MF_00600}; Heat shock protein 60; Protein Cpn60 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
groEL; molecular chaperone GroEL
L2_057_000G1_scaffold_743_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2991..3275)
DNA (285bp) protein (95aa)
10 kDa chaperonin n=79 Tax=Staphylococcus RepID=CH10_STAEQ
Heat shock protein 60 family co-chaperone GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L2_057_000G1_scaffold_743_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3450..4190
DNA (741bp) protein (247aa)
Abortive infection family protein n=33 Tax=Staphylococcus epidermidis RepID=Q5HMY9_STAEQ
abortive infection family protein
Abortive infection family protein {ECO:0000313|EMBL:AAW54811.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_743_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4250..4774)
DNA (525bp) protein (175aa)
SdrH protein n=1 Tax=Staphylococcus epidermidis NIHLM039 RepID=J0PLP8_STAEP
sdrH; sdrH protein
SdrH {ECO:0000313|EMBL:AAF72511.1}; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis.;"
L2_057_000G1_scaffold_743_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4939..5472)
DNA (534bp) protein (178aa)
Ser-Asp rich fibrinogen-binding protein n=2 Tax=Staphylococcus epidermidis RepID=R8A515_STAEP
SdrH protein {ECO:0000313|EMBL:EFE58475.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
sdrH; sdrH protein
L2_057_000G1_scaffold_743_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5815..6609
DNA (795bp) protein (265aa)
Hydrolase, carbon-nitrogen family n=1 Tax=Staphylococcus epidermidis BCM-HMP0060 RepID=C5Q6B2_STAEP
carbon-nitrogen family hydrolase
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:AAW54813.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_743_8

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7339..7950
DNA (612bp) protein (204aa)
Accessory gene regulator protein B n=2 Tax=Staphylococcus epidermidis RepID=C5Q6B1_STAEP
Acessory regulator protein B {ECO:0000313|EMBL:ETJ37930.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
agrB; accessory gene regulator protein B
L2_057_000G1_scaffold_743_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7934..8074
DNA (141bp) protein (47aa)
Accessory gene regulator protein D n=39 Tax=Staphylococcus epidermidis RepID=Q5HMY4_STAEQ
agrD; accessory gene regulator protein D
Accessory gene regulator protein D {ECO:0000313|EMBL:AAW54815.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_743_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8101..8868
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis BVS058A4 RepID=K8NMF7_STAEP
AgrC protein {ECO:0000313|EMBL:CAA89195.1}; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis.;"
accessory gene regulator C
L2_057_000G1_scaffold_743_11
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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8871..9302
DNA (432bp) protein (144aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=27 Tax=Staphylococcus epidermidis RepID=C5Q6A9_STAEP
Histidine kinase {ECO:0000313|EMBL:ETJ12456.1}; Flags: Fragment;; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
accessory gene regulator protein C
L2_057_000G1_scaffold_743_12
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9319..10035
DNA (717bp) protein (239aa)
Accessory gene regulator protein A n=58 Tax=Staphylococcus epidermidis RepID=AGRA_STAEQ
accessory gene regulator A
Accessory regulator protein A {ECO:0000313|EMBL:ETJ12457.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L2_057_000G1_scaffold_743_13
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10103..11062)
DNA (960bp) protein (320aa)
Kinase, PfkB family n=14 Tax=Staphylococcus epidermidis RepID=C5Q6A7_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ETJ12458.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
pfkB carbohydrate kinase family protein
L2_057_000G1_scaffold_743_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(11069..12541)
DNA (1473bp) protein (491aa)
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EFE58468.1}; EC=3.2.1.26 {ECO:0000313|EMBL:EFE58468.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
cscA; sucrose-6-phosphate hydrolase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=30 Tax=Staphylococcus epidermidis RepID=Q5HMY0_STAEQ
L2_057_000G1_scaffold_743_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12801..13754)
DNA (954bp) protein (318aa)
Sucrose operon repressor n=20 Tax=Staphylococcus epidermidis RepID=Q5HMX8_STAEQ
scrR; sucrose operon repressor
Sucrose operon repressor {ECO:0000313|EMBL:AAW54828.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_743_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13889..15166)
DNA (1278bp) protein (426aa)
Ammonium transporter n=4 Tax=Staphylococcus epidermidis RepID=D1WIJ9_STAEP
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
probabale ammonium transporter
L2_057_000G1_scaffold_743_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15559..15783)
DNA (225bp) protein (75aa)
Uncharacterized protein n=45 Tax=Staphylococcus epidermidis RepID=Q5HMX6_STAEQ
Hypothetical protein SAV2044
Uncharacterized protein {ECO:0000313|EMBL:EFE58465.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_743_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15835..16887)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=21 Tax=Staphylococcus epidermidis RepID=Q8CRQ9_STAES
hypothetical protein
YeeE/YedE family protein {ECO:0000313|EMBL:EFE58464.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_743_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16973..17254)
DNA (282bp) protein (94aa)
Uncharacterized protein n=22 Tax=Staphylococcus epidermidis RepID=Q5HMH2_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58463.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_743_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(17400..18035)
DNA (636bp) protein (212aa)
Redox-sensing transcriptional repressor Rex n=18 Tax=Staphylococcus epidermidis RepID=REX_STAES
redox-sensing transcriptional repressor Rex
Redox-sensing transcriptional repressor Rex {ECO:0000255|HAMAP-Rule:MF_01131}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
L2_057_000G1_scaffold_743_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18383..20317
DNA (1935bp) protein (645aa)
ABC transporter, ATP-binding protein n=3 Tax=Staphylococcus epidermidis RepID=C5Q699_STAEP
vga protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE58461.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_743_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20659..22275
DNA (1617bp) protein (539aa)
DNA mismatch repair protein MutS n=23 Tax=Staphylococcus epidermidis RepID=Q8CNM0_STAES
DNA mismatch repair protein MutS
MutS domain V protein {ECO:0000313|EMBL:EFE58460.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_743_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(22358..23380)
DNA (1023bp) protein (341aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
tRNA N6-adenosine threonylcarbamoyltransferase n=37 Tax=Staphylococcus epidermidis RepID=TSAD_STAEQ
FIG134348: essential endopeptidase
L2_057_000G1_scaffold_743_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23377..23838)
DNA (462bp) protein (154aa)
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine N-acetyltransfer n=50 Tax=Staphylococcus epidermidis RepID=Q8CNL8_STAES
Alanine acetyltransferase {ECO:0000313|EMBL:ESV20059.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L2_057_000G1_scaffold_743_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23811..24473)
DNA (663bp) protein (221aa)
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EFE58457.1}; EC=3.4.24.57 {ECO:0000313|EMBL:EFE58457.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized protein n=41 Tax=Staphylococcus RepID=Q5HMG5_STAEQ
Inactive homolog of metal-dependent proteases,putative molecular chaperone
L2_057_000G1_scaffold_743_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24454..24915)
DNA (462bp) protein (154aa)
Uncharacterized protein n=35 Tax=Staphylococcus epidermidis RepID=Q5HMG4_STAEQ
ATPase YjeE, predicted to have essential role in cell wall biosynthesis
Uncharacterized protein {ECO:0000313|EMBL:AAW55002.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L2_057_000G1_scaffold_743_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25232..27082
DNA (1851bp) protein (617aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=3 Tax=Staphylococcus epidermidis RepID=C5Q692_STAEP
L2_057_000G1_scaffold_743_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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27099..28841
DNA (1743bp) protein (581aa)
ilvB; acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Acetolactate synthase n=3 Tax=Staphylococcus epidermidis RepID=C5Q691_STAEP
L2_057_000G1_scaffold_743_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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28841..29074
DNA (234bp) protein (78aa)
Acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit, truncation n=79 Tax=Staphylococcus epidermidis RepID=Q5HMG1_STAEQ
ACT domain protein {ECO:0000313|EMBL:EFE58453.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L2_057_000G1_scaffold_743_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29191..30195
DNA (1005bp) protein (335aa)
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000255|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000255|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000255|HAMAP-Rule:MF_00435}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Ketol-acid reductoisomerase n=27 Tax=Bacteria RepID=ILVC_STAEQ
Displaying items 1-30 of 36 in total

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