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L2_057_000G1_scaffold_540_15

Organism: dasL2_057_000G1_concoct_26_sub_fa

partial RP 28 / 55 MC: 1 BSCG 27 / 51 ASCG 12 / 38 MC: 1
Location: comp(15439..18948)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 1169.0
  • Bit_score: 2298
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Staphylococcus warneri (strain SG1) RepID=L7X1V7_STAWS similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 1169.0
  • Bit_score: 2298
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.9
  • Coverage: 1169.0
  • Bit_score: 2298
  • Evalue 0.0

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Taxonomy

Staphylococcus warneri → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3510
TTGAGACAAGTTATTTCTAATTATGTAAAAGAAGATAAACGTTTTCAGGAATTAGACCAGGTTTTTGGCCAAGATAATATTTTAGTTACGGGTCTATCACCTTCAGCAAAAGCAACCATTATTGCTGAAAAATATTTAGCTGATCAAAAACAAATGTTGTTAGTAACTAATAATCTGTATCAAGCAGATAAAATCGAAGTGGATATATTACAATATGTCAGTGGTGAAGAAATTTATAAATACCCAGTTCAAGATATCATGACCGAAGAATTTTCTACACAAAGCCCTCAACTTATGAGTGAGCGTGTTAGAACGCTAACCGCTCTTGCTCATGGGGAAAAAGGGTTATTTATTGTTCCGTTAAATGGATTGAAAAAGTGGTTAACACCAGTAGAAATGTGGCGCAATCATCAAATGACGTTAAATGTTGGTGATGATATGGATGTTGACGATTTTCTGAATAAATTAGTCAATATGGGATATCGTAGAGAAAGTGTTGTTTCTCACATTGGTGAATTCTCACTTAGAGGTGGCATTATAGATATTTATCCTTTAATTGGAGCCCCTGTTAGAATTGAATTATTTGATACAGAAATAGATTCAATTCGTGATTTCGATGTGGAAACACAACGCTCTAACGATAACTTAGAATCAGTAGAAATTACTACGGCAAGTGACTATATTATTACTGATGAAGTGATTAATCATCTACAAACACAATTAAAGACCGCTTATGAAGATACAAGACCAAAAATTGAAAAATCTGTGAGAAATGACTTAAAAGAGACATATGAAAGTTTCAAACTTTTTGAATCTACGTTCTTTGATCATCAATTATTACGACGATTAGTGGCATTTATGTATGACCAACCATCAACGATTATTGATTATTTTGCGAATGATGTTGTGATAGCTGTTGATGAATATAATCGTATTAAAGAAACAGAAGAAACGTTAACGACTGAAGTTGATGATTTTATTAATAACTTAATTGAAAGTGGTAATGGATTTATTGGTCAAAGTTTTATGCAATATGATGGCTTTGAAACTTTATTAGAAGAACGACCTGTGGCTTATTTTACACTTTTCACTTCTTCAATGCCTGTTGAATTAGATCATATTATTAAATTCTCATGTAAACCAGTACAGCAGTTCTATGGTCAATACGACATTATGCGTTCAGAGTTCCAAAGATTTATCCATAATGACTATGCGATTGTAGTATTGGTCGAAACAGAGACGAAGGTTGAACGTATACAATCAATGCTTAATGAAATGCATATACCAGTCGTAACACATATTGATCAGGCTTCAACAAGTGGCCAAGCAGTTGTTGTAGAAGGCAGTCTGTCTGAAGGTTTTGAATTACCCTATATGCAGTTAGTGGTTATTACAGAAAGGGAATTATTTAAGACCAAGCAGAAAAAGCAACGTAAACGTACTAAAACAATGTCGAATGCAGAAAAAATTAAGTCATACCAAGATTTAAATGTTGGAGATTATGTTGTTCACGTTCATCACGGTGTAGGACGATATTTAGGTGTAGAAACTTTAGAAGTTGGAGAACAACATAGGGACTATATCAAGTTACAGTACAAAGGTACAGACCAATTGTTCGTTCCGGTTGATCAAATGGATCAAGTTCAAAAATATGTTGCTTCCGAAGACAAATCACCTCGCTTAAATAAACTAGGTGGAACTGAATGGAAAAAGACGAAAGCTAAAGTTCAACAAAGTGTTGAAGACATAGCAGATGAATTAATCGATTTATATAAACAAAGAGAAATGTCAGTTGGCTATCAATTTGGTCCAGACACTGAAGAACAGTCTACGTTTGAATTAGACTTCCCATATGAGCTAACACCAGACCAAAGTAAATCTATTGATGAAATAAAAGGGGACATGGAACGTGAACGTCCAATGGATCGCTTATTATGTGGTGATGTAGGTTATGGTAAGACTGAGGTTGCTGTTCGTGCCGCTTTCAAAGCTGTCATGGAAGGTAAACAGGTCGCATTCCTTGTACCTACGACGATATTAGCTCAACAACATTACGAAACATTAATTGAACGTATGCAAGATTTTCCAGTTGAAATTCAATTGATTAGTAGATTCCGCTCAACTAAAGAAGTGAAAGAAACTAAAGAAGGACTCAAATCTGGTTATGTAGATATTGTTGTAGGTACACATAAGTTATTAGGTAAGGATATCCATTACAAAGATTTAGGCTTACTCATTGTCGATGAAGAACAACGTTTTGGTGTGCGTCATAAAGAAAGAATTAAGACGCTGAAAAATAATGTAGATGTGTTAACGTTAACAGCTACGCCGATACCAAGAACATTGCATATGAGTATGCTTGGTGTGCGTGATTTATCAGTCATCGAAACACCACCTGAAAATCGTTTCCCAGTGCAAACTTATGTTTTAGAACAAAATACCAACTTTATTAAAGAAGCATTAGAACGAGAACTATCTCGTGATGGTCAAGTATTCTATTTATATAATAAAGTTCAGTCCATCTATGAAAAGAGAGAGCAACTTCAAATGTTAATGCCAGATGCCAACATAGCTGTCGCACATGGACAAATGACTGAACGAGATTTAGAGGAAACAATGCTCAGTTTCATCAATCATGAATACGATATCTTAGTGACTACGACAATCATTGAAACTGGTGTCGATGTACCAAATGCGAATACATTGATTATTGAAGAAGCGGATCGCTTCGGTTTAAGTCAATTGTACCAATTACGTGGACGTGTAGGTCGTTCAAGTAGAATAGGGTATGCTTATTTCCTTCATCCTGCAAATAAGGTATTAAATGAAACAGCTGAGGAAAGACTACAAGCCATTAAAGAATTTACCGAATTAGGTTCAGGATTTAAAATAGCGATGCGCGACTTGAATATTAGAGGGGCAGGTAATTTACTTGGGAAACAACAACATGGATTTATAGATTCAGTTGGTTTCGACTTATACTCTCAAATGCTTGAAGAAGCGGTCAATGAAAAACGGGGTATCAAAGAGGAAGCGCCAGATGTTCCTGATGTAGAAGTCGAACTGAATTTAGATGCCTATTTACCGGCGGAATATATTCAAAATGAACAAGCTAAAATTGAAATTTATAAAAAACTACGCAAAGTGGAAACAGAAGATCAACTCATGGATATTAAAGATGAACTCATCGATCGCTTCAACGATTATCCAACTGAAGTTGAACGTTTATTAGATATTGTAGAAATCAAAACGCATGCACTTCATGCAGGTATTACAAAAATTAAAGATATGGGTAAACAAATTCAAATATTCTTATCTGAGAAATCAACTGCTGATATTGACGGAGAGGCATTATTTAAAAATACACAACCGCTTGGAAGAACGATGAAGGTCGGCGTAGAGAATGGTGCAATGAAAGTGACACTCACTAAATCTAAACAATGGCTAGACAACTTAAAATTCTTAGTGAAATGTATTGAAGAAAGTATGAGCATTAAAGATGAAGCATAA
PROTEIN sequence
Length: 1170
LRQVISNYVKEDKRFQELDQVFGQDNILVTGLSPSAKATIIAEKYLADQKQMLLVTNNLYQADKIEVDILQYVSGEEIYKYPVQDIMTEEFSTQSPQLMSERVRTLTALAHGEKGLFIVPLNGLKKWLTPVEMWRNHQMTLNVGDDMDVDDFLNKLVNMGYRRESVVSHIGEFSLRGGIIDIYPLIGAPVRIELFDTEIDSIRDFDVETQRSNDNLESVEITTASDYIITDEVINHLQTQLKTAYEDTRPKIEKSVRNDLKETYESFKLFESTFFDHQLLRRLVAFMYDQPSTIIDYFANDVVIAVDEYNRIKETEETLTTEVDDFINNLIESGNGFIGQSFMQYDGFETLLEERPVAYFTLFTSSMPVELDHIIKFSCKPVQQFYGQYDIMRSEFQRFIHNDYAIVVLVETETKVERIQSMLNEMHIPVVTHIDQASTSGQAVVVEGSLSEGFELPYMQLVVITERELFKTKQKKQRKRTKTMSNAEKIKSYQDLNVGDYVVHVHHGVGRYLGVETLEVGEQHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKSPRLNKLGGTEWKKTKAKVQQSVEDIADELIDLYKQREMSVGYQFGPDTEEQSTFELDFPYELTPDQSKSIDEIKGDMERERPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVEIQLISRFRSTKEVKETKEGLKSGYVDIVVGTHKLLGKDIHYKDLGLLIVDEEQRFGVRHKERIKTLKNNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNTNFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPDANIAVAHGQMTERDLEETMLSFINHEYDILVTTTIIETGVDVPNANTLIIEEADRFGLSQLYQLRGRVGRSSRIGYAYFLHPANKVLNETAEERLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKRGIKEEAPDVPDVEVELNLDAYLPAEYIQNEQAKIEIYKKLRKVETEDQLMDIKDELIDRFNDYPTEVERLLDIVEIKTHALHAGITKIKDMGKQIQIFLSEKSTADIDGEALFKNTQPLGRTMKVGVENGAMKVTLTKSKQWLDNLKFLVKCIEESMSIKDEA*