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L2_057_000G1_scaffold_540

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000G1_scaffold_540_1
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1351..2838)
DNA (1488bp) protein (496aa)
lysS; lysyl-tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
Lysine--tRNA ligase n=2 Tax=Staphylococcus warneri RepID=L7WZA4_STAWS
L2_057_000G1_scaffold_540_2
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3162..3641)
DNA (480bp) protein (160aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=2 Tax=Staphylococcus warneri RepID=L7WU10_STAWS
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:AGC91467.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
L2_057_000G1_scaffold_540_3
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3642..4007)
DNA (366bp) protein (122aa)
Dihydroneopterin aldolase n=3 Tax=Staphylococcus RepID=L7WZE6_STAWS
dihydroneopterin aldolase
Dihydroneopterin aldolase {ECO:0000313|EMBL:AGC91468.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
L2_057_000G1_scaffold_540_4
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3985..4788)
DNA (804bp) protein (268aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
Dihydropteroate synthase n=2 Tax=Staphylococcus warneri RepID=L7WYJ7_STAWS
dihydropteroate synthase
L2_057_000G1_scaffold_540_5
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4992..5924)
DNA (933bp) protein (311aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
Cysteine synthase n=3 Tax=Staphylococcus RepID=L7X1U6_STAWS
cysteine synthase
L2_057_000G1_scaffold_540_6
Staphylococcus pasteuri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6096..6977)
DNA (882bp) protein (294aa)
33 kDa chaperonin n=3 Tax=Staphylococcus RepID=L7WZB1_STAWS
hslO; chaperonin HslO
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1276282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus pasteuri SP1.;"
L2_057_000G1_scaffold_540_7
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7211..9268)
DNA (2058bp) protein (686aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Staphylococcus warneri RepID=L7WU17_STAWS
cell division protein FtsH
L2_057_000G1_scaffold_540_8
Streptococcus pneumoniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9537..10073)
DNA (537bp) protein (179aa)
Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:CRG02200.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CRG02200.1};; TaxID=1313 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae.;"
Hypoxanthine phosphoribosyltransferase n=1 Tax=Staphylococcus warneri (strain SG1) RepID=L7WZF1_STAWS
hypoxanthine phosphoribosyltransferase
L2_057_000G1_scaffold_540_9
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10077..11378)
DNA (1302bp) protein (434aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
tRNA(Ile)-lysidine synthase n=3 Tax=Bacteria RepID=L7WYK3_STAWS
tRNA(Ile)-lysidine synthetase
L2_057_000G1_scaffold_540_10
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11541..11948)
DNA (408bp) protein (136aa)
Uncharacterized protein n=5 Tax=Bacteria RepID=L7X1U9_STAWS
S1 family RNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:AGC91475.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
L2_057_000G1_scaffold_540_11
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12051..12449)
DNA (399bp) protein (133aa)
Septum formation initiator n=3 Tax=Bacteria RepID=F3SNH7_STAWA
putative cell division protein
Putative cell division protein {ECO:0000313|EMBL:AGC91476.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
L2_057_000G1_scaffold_540_12
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12470..12736)
DNA (267bp) protein (89aa)
Uncharacterized protein n=3 Tax=Staphylococcus warneri RepID=L7WU22_STAWS
hypothetical protein
S4 domain protein {ECO:0000313|EMBL:EEQ79460.1}; TaxID=596319 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri L37603.;"
L2_057_000G1_scaffold_540_13
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12733..13923)
DNA (1191bp) protein (397aa)
MazG nucleotide pyrophosphohydrolase domain protein n=1 Tax=Staphylococcus warneri VCU121 RepID=F3SNH9_STAWA
putative tetrapyrrole (corrin/porphyrin) methylase
Putative tetrapyrrole (Corrin/porphyrin) methylase {ECO:0000313|EMBL:AGC91478.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
L2_057_000G1_scaffold_540_14
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13920..15449)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=2 Tax=Staphylococcus warneri RepID=L7WYK7_STAWS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC91479.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
L2_057_000G1_scaffold_540_15
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15439..18948)
DNA (3510bp) protein (1170aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
Transcription-repair-coupling factor n=1 Tax=Staphylococcus warneri (strain SG1) RepID=L7X1V7_STAWS
transcription-repair coupling factor
L2_057_000G1_scaffold_540_16
Streptococcus pneumoniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18945..19517)
DNA (573bp) protein (191aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1313 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae.;"
Peptidyl-tRNA hydrolase n=2 Tax=Staphylococcus warneri RepID=L7WZC5_STAWS
L2_057_000G1_scaffold_540_17
Staphylococcus pasteuri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(19751..20431)
DNA (681bp) protein (227aa)
50S ribosomal protein L25 n=3 Tax=Staphylococcus RepID=L7WU29_STAWS
50S ribosomal protein L25/general stress protein Ctc
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1276282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus pasteuri SP1.;"
L2_057_000G1_scaffold_540_18
Staphylococcus pasteuri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20566..21531)
DNA (966bp) protein (322aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1276282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus pasteuri SP1.;"
Ribose-phosphate pyrophosphokinase n=4 Tax=Staphylococcus RepID=L7WZG2_STAWS
ribose-Phosphate pyrophosphokinase
L2_057_000G1_scaffold_540_19
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21635..22999)
DNA (1365bp) protein (455aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase (EC:2.3.1.157)
Bifunctional protein GlmU n=2 Tax=Staphylococcus warneri RepID=L7WYM3_STAWS
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
L2_057_000G1_scaffold_540_20
unknown

Not on your lists

23101..23313
DNA (213bp) protein (71aa)

This feature has no annotations

L2_057_000G1_scaffold_540_21
Streptococcus pneumoniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23310..23621)
DNA (312bp) protein (104aa)
Putative septation protein SpoVG n=2 Tax=Staphylococcus warneri RepID=L7X1Y0_STAWS
regulatory protein SpoVG
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=1313 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae.;"
L2_057_000G1_scaffold_540_22
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23694..24068)
DNA (375bp) protein (125aa)
Translation initiation inhibitor n=3 Tax=Staphylococcus warneri RepID=L7WZE5_STAWS
translation initiation inhibitor
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EEQ79451.1}; TaxID=596319 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri L37603.;"
L2_057_000G1_scaffold_540_23
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24085..24876)
DNA (792bp) protein (264aa)
Pur operon repressor n=3 Tax=Staphylococcus warneri RepID=L7WU55_STAWS
pur operon repressor
Pur operon repressor PurR {ECO:0000313|EMBL:EEQ79450.1}; TaxID=596319 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri L37603.;"
L2_057_000G1_scaffold_540_24
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24924..25877)
DNA (954bp) protein (318aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=3 Tax=Staphylococcus RepID=L7WZI3_STAWS
putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L2_057_000G1_scaffold_540_25
Staphylococcus pasteuri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26074..26337)
DNA (264bp) protein (88aa)
Uncharacterized protein n=4 Tax=Staphylococcus RepID=L7WYM6_STAWS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ25873.1}; TaxID=1276282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus pasteuri SP1.;"
L2_057_000G1_scaffold_540_26
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(26437..27327)
DNA (891bp) protein (297aa)
ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Staphylococcus warneri RepID=L7X1Z0_STAWS
L2_057_000G1_scaffold_540_27
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27332..27880)
DNA (549bp) protein (183aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
Ribonuclease M5 n=2 Tax=Staphylococcus warneri RepID=L7WZF7_STAWS
hypothetical protein
L2_057_000G1_scaffold_540_28
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28029..28799)
DNA (771bp) protein (257aa)
TatD family deoxyribonuclease n=2 Tax=Staphylococcus warneri RepID=L7WU71_STAWS
TatD family deoxyribonuclease
TatD family deoxyribonuclease {ECO:0000313|EMBL:AGC91492.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
L2_057_000G1_scaffold_540_29
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(28826..30796)
DNA (1971bp) protein (657aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
methionyl-tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase n=2 Tax=Staphylococcus warneri RepID=L7WZJ8_STAWS
L2_057_000G1_scaffold_540_30
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31025..31864)
DNA (840bp) protein (280aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
Ribosomal RNA small subunit methyltransferase I n=2 Tax=Staphylococcus warneri RepID=L7WYN0_STAWS
tetrapyrrole (corrin/porphyrin) methylase family protein
Displaying items 1-30 of 39 in total

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