ggKbase home page

L2_057_000M1_scaffold_52

Search features with annotation key words

Displaying items 1-30 of 111 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_52_1
Bacteroides fragilis CAG:558, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..276)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:558 RepID=R5RIX6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ40483.1}; TaxID=1263047 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:558.;"
L2_057_000M1_scaffold_52_2
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(281..922)
DNA (642bp) protein (214aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R5RPC6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD44491.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_057_000M1_scaffold_52_3
Bacteroides fragilis CAG:558, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1008..1241
DNA (234bp) protein (78aa)
DNA-binding helix-turn-helix protein n=4 Tax=Bacteroides RepID=R5J5Y3_9BACE
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCZ40485.1}; TaxID=1263047 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:558.;"
hypothetical protein
L2_057_000M1_scaffold_52_4
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1381..2076)
DNA (696bp) protein (232aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R9HHP3_BACT4
Putative Metallophos Calcineurin-like phosphoesterase {ECO:0000313|EMBL:CDD44493.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
Metallophos, Calcineurin-like phosphoesterase
L2_057_000M1_scaffold_52_5
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2082..2984)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9HH16_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOS03297.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
L2_057_000M1_scaffold_52_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3041..3601)
DNA (561bp) protein (187aa)
Metallophosphoesterase n=2 Tax=Bacteroides RepID=R6ZED8_9BACE
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:EYB09361.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
metallophosphoesterase
L2_057_000M1_scaffold_52_7
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3749..4060)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6ZTX3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD44496.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
hypothetical protein
L2_057_000M1_scaffold_52_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4109..4408)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7APL1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EYB09363.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
hypothetical protein
L2_057_000M1_scaffold_52_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4665..5678)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R9HHP6_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EYB09364.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L2_057_000M1_scaffold_52_10
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5823..6317)
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6YZU1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD41568.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_057_000M1_scaffold_52_11
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6347..7357)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7AG67_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD41567.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
hypothetical protein
L2_057_000M1_scaffold_52_12
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7421..8866)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6ZKR5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD41566.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
phage/plasmid primase, P4 family
L2_057_000M1_scaffold_52_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8883..9200)
DNA (318bp) protein (106aa)
DNA binding domain protein excisionase family n=2 Tax=Bacteroides RepID=R6ZDL8_9BACE
DNA binding , excisionase family domain protein {ECO:0000313|EMBL:EXY76780.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
hypothetical protein
L2_057_000M1_scaffold_52_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9478..10545)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6ZDL4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY76779.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
L2_057_000M1_scaffold_52_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10609..11955)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7AG60_9BACE
Phage integrase family protein {ECO:0000313|EMBL:EXY76778.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
integrase family protein
L2_057_000M1_scaffold_52_16
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12466..12810
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6ZKQ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD41556.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_057_000M1_scaffold_52_17
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12858..14315
DNA (1458bp) protein (486aa)
Por secretion system protein porY/putative sensor histidine kinase n=1 Tax=Bacteroides fragilis CAG:47 RepID=R6YZS7_9BACE
Por secretion system protein porY/putative sensor histidine kinase {ECO:0000313|EMBL:CDD41553.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_057_000M1_scaffold_52_18
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14305..15297
DNA (993bp) protein (331aa)
Response regulator receiver protein n=2 Tax=Bacteroides RepID=R7AG59_9BACE
Response regulator receiver protein {ECO:0000313|EMBL:CDD41552.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
response regulator receiver protein
L2_057_000M1_scaffold_52_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16096..16839
DNA (744bp) protein (248aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8XI53_BACFG
Fic/DOC family protein {ECO:0000313|EMBL:EXY85451.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
cell division protein
L2_057_000M1_scaffold_52_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17337..17453
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1FUF3_BACFG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ79342.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L2_057_000M1_scaffold_52_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17609..18202
DNA (594bp) protein (198aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6I464_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY91462.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L2_057_000M1_scaffold_52_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18591..21620)
DNA (3030bp) protein (1010aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1G2V6_BACFG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD48172.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L2_057_000M1_scaffold_52_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21841..22935
DNA (1095bp) protein (365aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=Q64WF3_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY98041.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_057_000M1_scaffold_52_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22932..23945
DNA (1014bp) protein (338aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=E1WSN5_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY66312.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
L2_057_000M1_scaffold_52_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24065..25069
DNA (1005bp) protein (335aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=E1WSN6_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY66313.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
L2_057_000M1_scaffold_52_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25404..25574)
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=E1WSN7_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW21971.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L2_057_000M1_scaffold_52_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26390..26908
DNA (519bp) protein (173aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I454_9BACE
upaY; putative LPS biosynthesis related transcriptional regulatory protein
Transcription termination factor nusG family protein {ECO:0000313|EMBL:EXZ45409.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L2_057_000M1_scaffold_52_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26928..27401
DNA (474bp) protein (158aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=D1JK83_9BACE
upaZ; putative LPS biosynthesis related transcriptional regulatory protein
UpxZ of transcription anti-terminator antagonists family protein {ECO:0000313|EMBL:EYA19853.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L2_057_000M1_scaffold_52_29
unknown

Not on your lists

comp(27469..27690)
DNA (222bp) protein (74aa)

This feature has no annotations

L2_057_000M1_scaffold_52_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27794..29248
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YZC5_9BACT
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:EXZ54489.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
capsular polysaccharide repeat unit transporter
Displaying items 1-30 of 111 in total

View Taxonomy