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L2_057_000M1_scaffold_60

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Displaying items 1-30 of 136 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_60_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..107)
DNA (105bp) protein (35aa)
MarR family protein n=2 Tax=Lachnospiraceae RepID=E5VMV8_9FIRM
transcriptional regulator MarR family
Uncharacterized protein {ECO:0000313|EMBL:EES77535.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_057_000M1_scaffold_60_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(354..1652)
DNA (1299bp) protein (433aa)
Integrase n=2 Tax=Eubacterium RepID=C4ZDW8_EUBR3
integrase
Integrase {ECO:0000313|EMBL:ACR77094.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_057_000M1_scaffold_60_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1737..2357)
DNA (621bp) protein (207aa)
Helix-turn-helix n=7 Tax=Clostridiales RepID=D5HDS5_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBK90237.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_057_000M1_scaffold_60_4
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2533..2763
DNA (231bp) protein (77aa)
DNA binding domain, excisionase family n=6 Tax=Clostridiales RepID=D5HDS6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY77385.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
L2_057_000M1_scaffold_60_5
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3115..4641
DNA (1527bp) protein (509aa)
MobA/MobL family n=3 Tax=Clostridiales RepID=D6E499_9FIRM
MobA/MobL family.
MobA/MobL family {ECO:0000313|EMBL:CCX81700.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
L2_057_000M1_scaffold_60_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4727..5413)
DNA (687bp) protein (229aa)
Uncharacterized protein n=4 Tax=root RepID=D4S2F9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR77100.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_057_000M1_scaffold_60_7
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5410..5679)
DNA (270bp) protein (90aa)
Transcriptional regulator, ArsR family n=4 Tax=Clostridiales RepID=D6E4A1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCX81703.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
L2_057_000M1_scaffold_60_8

Not on your lists

comp(5937..6176)
DNA (240bp) protein (80aa)
Uncharacterized protein n=8 Tax=root RepID=D4S2G1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKC51535.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_057_000M1_scaffold_60_9
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6504..7028)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IVS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25896.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
N-acetyltransferase GCN5
L2_057_000M1_scaffold_60_10
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7255..7563)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R1D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43753.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
hypothetical protein
L2_057_000M1_scaffold_60_11
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7651..8550)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z7A0_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73178.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L2_057_000M1_scaffold_60_12
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8554..9417)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z7A1_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73179.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L2_057_000M1_scaffold_60_13
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9410..10327)
DNA (918bp) protein (306aa)
Antibiotic transport system ATP-binding protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z7A2_EUBE2
antibiotic transport system ATP-binding protein
Antibiotic transport system ATP-binding protein {ECO:0000313|EMBL:ACR73180.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L2_057_000M1_scaffold_60_14
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10412..11197)
DNA (786bp) protein (262aa)
Two-component system, OmpR family, response regulator n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z7A3_EUBE2
two-component system, OmpR family, response regulator
Two-component system, OmpR family, response regulator {ECO:0000313|EMBL:ACR73181.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L2_057_000M1_scaffold_60_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11624..11821)
DNA (198bp) protein (66aa)
Uncharacterized conserved protein n=2 Tax=Eubacterium rectale RepID=D4JIN2_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK93479.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L2_057_000M1_scaffold_60_16

Not on your lists

11948..12157
DNA (210bp) protein (70aa)
LexA repressor n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZE14_EUBR3
LexA repressor
Putative transcriptional regulator {ECO:0000313|EMBL:AGW28717.1}; TaxID=1348855 species="Bacteria; environmental samples.;" source="uncultured bacterium EB2.;"
L2_057_000M1_scaffold_60_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12114..12425
DNA (312bp) protein (104aa)
SOS-response transcriptional repressors (RecA-mediated autopeptidases) n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E042_9FIRM
LexA repressor
SOS-response transcriptional repressors (RecA-mediated autopeptidases) {ECO:0000313|EMBL:CBK91213.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_057_000M1_scaffold_60_18
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12796..14496)
DNA (1701bp) protein (567aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8VZP2_DESAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV63020.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
L2_057_000M1_scaffold_60_19
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14827..16596)
DNA (1770bp) protein (590aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VEH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58173.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L2_057_000M1_scaffold_60_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16597..17400)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RP21_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT28071.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_057_000M1_scaffold_60_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17439..17960)
DNA (522bp) protein (174aa)
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L234_9FIRM
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 {ECO:0000313|EMBL:CBL13674.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_057_000M1_scaffold_60_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18083..18337)
DNA (255bp) protein (85aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=V8BYE3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR77274.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_057_000M1_scaffold_60_23
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18408..19139)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K909_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY61514.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
hypothetical protein
L2_057_000M1_scaffold_60_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19154..19564)
DNA (411bp) protein (137aa)
Peptide deformylase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZHA4_EUBR3
peptide deformylase
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_057_000M1_scaffold_60_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19564..19905)
DNA (342bp) protein (114aa)
Arsenate reductase and related proteins, glutaredoxin family n=2 Tax=Roseburia RepID=D4L0W5_9FIRM
Arsenate reductase and related proteins, glutaredoxin family
Arsenate reductase and related proteins, glutaredoxin family {ECO:0000313|EMBL:CBL13255.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_057_000M1_scaffold_60_26
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19908..20126)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=N2B163_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT28629.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L2_057_000M1_scaffold_60_27
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20113..20640)
DNA (528bp) protein (176aa)
UPF0178 protein BN501_01237 n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HXL7_9FIRM
UPF0178 protein BN501_01237 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_057_000M1_scaffold_60_28
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20664..21035)
DNA (372bp) protein (124aa)
Putative glyoxalase n=1 Tax=Eubacterium sp. CAG:252 RepID=R6JXB5_9FIRM
Putative glyoxalase {ECO:0000313|EMBL:CDB67443.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
Lactoylglutathione lyase and related lyases
L2_057_000M1_scaffold_60_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21032..21412)
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIQ5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89609.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L2_057_000M1_scaffold_60_30
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21412..21804)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z7L2_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73290.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
Displaying items 1-30 of 136 in total

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