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L2_057_000M1_scaffold_114

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_114_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41..1969
DNA (1929bp) protein (643aa)
Heparinase II/III-like protein n=2 Tax=Parabacteroides merdae RepID=A7ADJ7_9PORP
Heparinase II/III-like protein {ECO:0000313|EMBL:EDN87139.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Heparinase II/III family protein
L2_057_000M1_scaffold_114_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1977..3188
DNA (1212bp) protein (404aa)
Glycosyl hydrolase, family 88 n=2 Tax=Parabacteroides merdae RepID=A7ADJ6_9PORP
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:EDN87138.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative exported hydrolase
L2_057_000M1_scaffold_114_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3449..4348
DNA (900bp) protein (300aa)
Type I phosphodiesterase / nucleotide pyrophosphatase n=3 Tax=Parabacteroides merdae RepID=A7ADJ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08641.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_057_000M1_scaffold_114_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4341..8372)
DNA (4032bp) protein (1344aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides merdae RepID=A7ADJ3_9PORP
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDN87134.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
histidine kinase
L2_057_000M1_scaffold_114_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8457..9491
DNA (1035bp) protein (345aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=3 Tax=Parabacteroides RepID=A7ADJ2_9PORP
Iron chelate uptake ABC transporter FeCT family permease protein {ECO:0000313|EMBL:CDD14082.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
iron(III) ABC transporter permease
L2_057_000M1_scaffold_114_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9499..10542
DNA (1044bp) protein (348aa)
ABC transporter, ATP-binding protein n=2 Tax=Parabacteroides merdae RepID=A7ADJ1_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN87133.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
iron(III) ABC transporter ATP-binding protein
L2_057_000M1_scaffold_114_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10599..11462
DNA (864bp) protein (288aa)
MATE efflux family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WXP7_9PORP
MATE efflux family protein {ECO:0000313|EMBL:CDD14080.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
MATE efflux family protein
L2_057_000M1_scaffold_114_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11462..11950
DNA (489bp) protein (163aa)
MATE efflux family protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZBR0_9PORP
MATE efflux family protein {ECO:0000313|EMBL:EDN87132.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
MATE efflux family protein
L2_057_000M1_scaffold_114_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12023..12595
DNA (573bp) protein (191aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7ADI9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87131.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_114_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12705..13088
DNA (384bp) protein (128aa)
Chaperonin GroS n=5 Tax=Parabacteroides RepID=A7ADI8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15006.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
chaperonin
L2_057_000M1_scaffold_114_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13184..13981
DNA (798bp) protein (266aa)
ferredoxin-NADP(+) reductase subunit alpha (EC:1.18.1.2)
Oxidoreductase NAD-binding domain protein n=2 Tax=Parabacteroides merdae RepID=A7ADI7_9PORP
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:EDN87129.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_057_000M1_scaffold_114_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14000..15469
DNA (1470bp) protein (490aa)
Glutamate synthase (NADPH), homotetrameric n=2 Tax=Parabacteroides merdae RepID=A7ADI6_9PORP
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EDN87128.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
NADPH-dependent glutamate synthase
L2_057_000M1_scaffold_114_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15787..17796)
DNA (2010bp) protein (670aa)
SusD family protein n=2 Tax=Parabacteroides merdae RepID=A7ADI5_9PORP
SusD family protein {ECO:0000313|EMBL:EDN87127.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ragB/SusD family protein
L2_057_000M1_scaffold_114_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18151..21009)
DNA (2859bp) protein (953aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Parabacteroides RepID=A7ADI4_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDN87126.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Outer membrane receptor proteins, mostly Fe transport
L2_057_000M1_scaffold_114_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21639..22121)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7ADI0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87122.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_057_000M1_scaffold_114_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22103..22558)
DNA (456bp) protein (152aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7ADH9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87121.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_114_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22565..23902)
DNA (1338bp) protein (446aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=4 Tax=Parabacteroides RepID=A7ADH8_9PORP
L2_057_000M1_scaffold_114_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23914..24324)
DNA (411bp) protein (137aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ADH7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14649.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_057_000M1_scaffold_114_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24331..24972)
DNA (642bp) protein (214aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=4 Tax=Parabacteroides RepID=A7ADH6_9PORP
L2_057_000M1_scaffold_114_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25089..25781)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XEB0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14651.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
amidophosphoribosyltransferase
L2_057_000M1_scaffold_114_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25756..26247)
DNA (492bp) protein (164aa)
Regulatory protein RecX n=2 Tax=Parabacteroides merdae RepID=A7ADH4_9PORP
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
regulatory protein
L2_057_000M1_scaffold_114_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26244..27092)
DNA (849bp) protein (283aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Release factor glutamine methyltransferase n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7ADH3_9PORP
prmC; protein-(glutamine-N5) methyltransferase
L2_057_000M1_scaffold_114_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27272..28315
DNA (1044bp) protein (348aa)
Riboflavin biosynthesis protein RibD n=2 Tax=Parabacteroides merdae RepID=A7ADH2_9PORP
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
riboflavin biosynthesis protein ribD
L2_057_000M1_scaffold_114_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28432..29814
DNA (1383bp) protein (461aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6BUW5_9PORP
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EDN87113.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_114_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29902..30621
DNA (720bp) protein (240aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ADH0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87112.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_114_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30639..31382
DNA (744bp) protein (248aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Isoprenyl transferase n=4 Tax=Parabacteroides RepID=A7ADG9_9PORP
UDP pyrophosphate synthetase
L2_057_000M1_scaffold_114_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31397..34084
DNA (2688bp) protein (896aa)
Outer membrane protein assembly complex, YaeT protein n=2 Tax=Parabacteroides merdae RepID=A7ADG8_9PORP
Outer membrane protein assembly complex, YaeT protein {ECO:0000313|EMBL:EDN87110.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
outer membrane protein
L2_057_000M1_scaffold_114_28
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34293..34808
DNA (516bp) protein (172aa)
Outer membrane protein n=5 Tax=Parabacteroides RepID=A7ADG6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15023.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
cationic outer membrane protein OmpH
L2_057_000M1_scaffold_114_29
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34881..35378
DNA (498bp) protein (166aa)
Outer membrane protein n=6 Tax=Parabacteroides RepID=A7ADG5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15024.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
cationic outer membrane protein OmpH
L2_057_000M1_scaffold_114_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35532..36368
DNA (837bp) protein (279aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Glutamate racemase n=3 Tax=Parabacteroides merdae RepID=A7ADG4_9PORP
glutamate racemase
Displaying items 1-30 of 69 in total

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