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L2_057_000M1_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_116_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(201..314)
DNA (114bp) protein (38aa)
Uncharacterized protein n=5 Tax=Bacteroides fragilis RepID=I8WVA3_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY50544.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L2_057_000M1_scaffold_116_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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404..2632
DNA (2229bp) protein (743aa)
pflB; putative formate acetyltransferase 1 (EC:2.3.1.54)
Formate acetyltransferase n=10 Tax=Bacteroides RepID=Q64WN8_BACFR
Formate acetyltransferase {ECO:0000313|EMBL:EKA84622.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L2_057_000M1_scaffold_116_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2637..3362
DNA (726bp) protein (242aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
Pyruvate formate-lyase activating enzyme n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64WN9_BACFR
pyruvate formate-lyase activating enzyme
L2_057_000M1_scaffold_116_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3595..4854)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=E1WRW2_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW21881.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L2_057_000M1_scaffold_116_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4909..5457)
DNA (549bp) protein (183aa)
Sigma-70 family RNA polymerase sigma factor n=11 Tax=Bacteroides RepID=C6I4A9_9BACE
putative RNA polymerase ECF-type sigma factor
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EYE55169.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L2_057_000M1_scaffold_116_6
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5645..6397
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=E1WRW0_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEZ26721.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L2_057_000M1_scaffold_116_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6502..7500)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I4B1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY98473.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
oxyR; redox-sensitive transcriptional activator
L2_057_000M1_scaffold_116_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7570..8043
DNA (474bp) protein (158aa)
DNA protection during starvation protein {ECO:0000313|EMBL:EYB09267.1}; EC=1.16.-.- {ECO:0000313|EMBL:EYB09267.1};; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
Non-specific DNA-binding protein Dps n=14 Tax=Bacteroides RepID=Q64WP4_BACFR
putative DNA-binding protein
L2_057_000M1_scaffold_116_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8147..9145)
DNA (999bp) protein (333aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=E1WRV7_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY98471.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_057_000M1_scaffold_116_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9200..10468)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=C6I4B4_9BACE
putative transmembrane protein
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EXY41797.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
L2_057_000M1_scaffold_116_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10718..11731)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HU95_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXY66375.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
hypothetical protein
L2_057_000M1_scaffold_116_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11754..12890)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JK28_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXZ95397.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
hypothetical protein
L2_057_000M1_scaffold_116_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12908..13960)
DNA (1053bp) protein (351aa)
Possible endo-beta-N-acetylglucosaminidase n=13 Tax=Bacteroides RepID=E1WRV3_BACF6
Putative endo-beta-N-acetylglucosaminidase F2 {ECO:0000313|EMBL:EXZ95396.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
endo-beta-N-acetylglucosaminidase
L2_057_000M1_scaffold_116_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13988..15532)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I4B8_9BACE
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:EXZ95395.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
hypothetical protein
L2_057_000M1_scaffold_116_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15545..18850)
DNA (3306bp) protein (1102aa)
SusC/RagA family TonB-linked outer membrane protein n=14 Tax=Bacteroides RepID=C6I4B9_9BACE
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:EXZ20343.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
putative outer membrane protein probably involved in nutrient binding
L2_057_000M1_scaffold_116_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19160..20170)
DNA (1011bp) protein (337aa)
Putative anti-sigma factor n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LFR7_BACFN
putative anti-sigma factor
FecR family protein {ECO:0000313|EMBL:EXZ95393.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
L2_057_000M1_scaffold_116_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20336..20935
DNA (600bp) protein (200aa)
RNA polymerase ECF-type sigma factor n=14 Tax=Bacteroides RepID=Q64WQ3_BACFR
putative RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAD48073.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L2_057_000M1_scaffold_116_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20912..22927)
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1FZ29_BACFG
Glycoside hydrolase 97 family protein {ECO:0000313|EMBL:EXZ29437.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
putative alpha-glucosidase protein
L2_057_000M1_scaffold_116_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22950..23807)
DNA (858bp) protein (286aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I3HUA3_BACFG
putative endonuclease/exonuclease/phosphatase family protein
Uncharacterized protein {ECO:0000313|EMBL:EIY98461.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_057_000M1_scaffold_116_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23878..24972)
DNA (1095bp) protein (365aa)
menE; putative O-succinylbenzoate--CoA ligase (EC:6.2.1.26)
Putative O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:CAH07022.1}; EC=6.2.1.26 {ECO:0000313|EMBL:CAH07022.1};; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
Putative O-succinylbenzoate--CoA ligase n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LFS1_BACFN
L2_057_000M1_scaffold_116_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24986..26005)
DNA (1020bp) protein (340aa)
O-succinylbenzoate synthase n=5 Tax=Bacteroides RepID=I8WVC5_BACFG
putative muconate cycloisomerase
O-succinylbenzoate synthase {ECO:0000313|EMBL:EIY50524.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L2_057_000M1_scaffold_116_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26054..26878)
DNA (825bp) protein (275aa)
menB; putative naphthoate synthase (EC:4.1.3.36)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
Dihydroxynapthoic acid synthetase n=7 Tax=Bacteroides RepID=Q64WQ8_BACFR
L2_057_000M1_scaffold_116_23
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26900..27904)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:47 RepID=R7ARN6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD45297.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
hypothetical protein
L2_057_000M1_scaffold_116_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27906..29573)
DNA (1668bp) protein (556aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=10 Tax=Bacteroides RepID=MEND_BACFN
menD; putative menaquinone biosynthesis protein
L2_057_000M1_scaffold_116_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29594..30700)
DNA (1107bp) protein (369aa)
Isochorismate synthase family protein {ECO:0000313|EMBL:EYE55149.1}; EC=5.4.4.2 {ECO:0000313|EMBL:EYE55149.1};; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
Possible isochorismate synthase n=5 Tax=Bacteroides RepID=Q5LFS6_BACFN
possible isochorismate synthase
L2_057_000M1_scaffold_116_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30697..31929)
DNA (1233bp) protein (411aa)
Haloacid dehalogenase-like hydrolase n=14 Tax=Bacteroides RepID=Q64WR2_BACFR
putative haloacid dehalogenase-like hydrolase
Haloacid dehalogenase-like hydrolase domain protein {ECO:0000313|EMBL:EYA40001.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
L2_057_000M1_scaffold_116_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32057..32200)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LFS8_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE46465.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L2_057_000M1_scaffold_116_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32496..34070)
DNA (1575bp) protein (525aa)
Peptide chain release factor 3 n=10 Tax=Bacteroides RepID=Q64WR5_BACFR
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
peptide chain release factor 3
L2_057_000M1_scaffold_116_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34095..34958)
DNA (864bp) protein (288aa)
rmlD; putative dTDP-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EYB09246.1}; EC=1.1.1.133 {ECO:0000313|EMBL:EYB09246.1};; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
dTDP-4-dehydrorhamnose reductase n=10 Tax=Bacteroides RepID=D1JK09_9BACE
L2_057_000M1_scaffold_116_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35093..35638)
DNA (546bp) protein (182aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=E1WRT6_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ79356.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
Displaying items 1-30 of 65 in total

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