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L2_057_000M1_scaffold_121

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_121_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..1151)
DNA (1149bp) protein (383aa)
NADPH dehydrogenase (EC:1.6.99.1)
Oxidoreductase, FAD/FMN-binding protein n=2 Tax=Parabacteroides merdae RepID=A7AKP4_9PORP
Oxidoreductase, FAD/FMN-binding protein {ECO:0000313|EMBL:EDN84566.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_057_000M1_scaffold_121_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1172..1897)
DNA (726bp) protein (242aa)
3-oxo-5-alpha-steroid 4-dehydrogenase. (EC:1.3.99.5)
3-oxo-5-alpha-steroid 4-dehydrogenase n=2 Tax=Parabacteroides merdae RepID=A7AKP3_9PORP
3-oxo-5-alpha-steroid 4-dehydrogenase {ECO:0000313|EMBL:EDN84565.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_057_000M1_scaffold_121_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1923..2624)
DNA (702bp) protein (234aa)
Transcriptional regulatory protein RprY n=2 Tax=Parabacteroides merdae RepID=A7AKP2_9PORP
Transcriptional regulatory protein RprY {ECO:0000313|EMBL:EDN84564.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
two component transcriptional regulator, winged helix family
L2_057_000M1_scaffold_121_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2632..2925)
DNA (294bp) protein (98aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AKP1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84563.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_121_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2949..6077)
DNA (3129bp) protein (1043aa)
Heavy metal efflux pump, CzcA family n=2 Tax=Parabacteroides merdae RepID=A7AKP0_9PORP
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:EDN84562.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acriflavin resistance protein
L2_057_000M1_scaffold_121_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6090..7115)
DNA (1026bp) protein (342aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Parabacteroides merdae RepID=A7AKN9_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EDN84561.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
membrane fusion protein transporter
L2_057_000M1_scaffold_121_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7154..8509)
DNA (1356bp) protein (452aa)
Outer membrane efflux protein n=3 Tax=Parabacteroides RepID=A7AKN8_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:CDD13519.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
outer membrane efflux protein
L2_057_000M1_scaffold_121_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8576..9187)
DNA (612bp) protein (204aa)
Transcriptional regulator, TetR family n=3 Tax=Parabacteroides RepID=A7AKN7_9PORP
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDD13518.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transcriptional regulator
L2_057_000M1_scaffold_121_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9408..10316
DNA (909bp) protein (303aa)
Transcriptional regulator, AraC family n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AKN6_9PORP
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDN84558.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L2_057_000M1_scaffold_121_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10341..10859)
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AKN5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84557.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_121_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11011..11202)
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6AV15_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84554.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_057_000M1_scaffold_121_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11626..13233
DNA (1608bp) protein (536aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=3 Tax=Parabacteroides RepID=A7AKN0_9PORP
L2_057_000M1_scaffold_121_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13243..15159
DNA (1917bp) protein (639aa)
Membrane protein insertase YidC n=2 Tax=Parabacteroides RepID=A7AKM9_9PORP
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
inner membrane protein translocase component YidC
L2_057_000M1_scaffold_121_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15224..16009)
DNA (786bp) protein (262aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=3 Tax=Parabacteroides RepID=A7AKM8_9PORP
L2_057_000M1_scaffold_121_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16045..18312)
DNA (2268bp) protein (756aa)
TrkA C-terminal domain protein n=4 Tax=Parabacteroides RepID=A7AKM7_9PORP
TrkA C-terminal domain protein {ECO:0000313|EMBL:CDD13510.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Na+/H+ antiporter
L2_057_000M1_scaffold_121_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18384..19022
DNA (639bp) protein (213aa)
Divergent AAA domain protein n=2 Tax=Parabacteroides merdae RepID=A7AKM6_9PORP
Divergent AAA domain protein {ECO:0000313|EMBL:EDN84548.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_121_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19045..20427)
DNA (1383bp) protein (461aa)
Nodulation efficiency protein D n=2 Tax=Parabacteroides merdae RepID=A7AKM5_9PORP
Nodulation efficiency protein D {ECO:0000313|EMBL:EDN84547.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
membrane-bound serine protease
L2_057_000M1_scaffold_121_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20689..21198
DNA (510bp) protein (170aa)
Sigma-70 region 2 n=3 Tax=Parabacteroides RepID=A7AKM4_9PORP
Sigma-70 region 2 {ECO:0000313|EMBL:EDN84546.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RNA polymerase ECF-type sigma factor
L2_057_000M1_scaffold_121_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21297..22319
DNA (1023bp) protein (341aa)
Beta-eliminating lyase n=3 Tax=Parabacteroides RepID=A7AKM3_9PORP
Beta-eliminating lyase {ECO:0000313|EMBL:EDN84545.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L-threonine aldolase
L2_057_000M1_scaffold_121_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22415..24283
DNA (1869bp) protein (623aa)
Ser/Thr phosphatase family protein n=2 Tax=Parabacteroides merdae RepID=A7AKM2_9PORP
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EDN84544.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_121_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24302..25672
DNA (1371bp) protein (457aa)
Xanthine permease n=2 Tax=Parabacteroides RepID=A7AKM1_9PORP
Xanthine permease {ECO:0000313|EMBL:EDN84543.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
purine permease
L2_057_000M1_scaffold_121_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25675..26241
DNA (567bp) protein (189aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=4 Tax=Parabacteroides RepID=A7AKM0_9PORP
L2_057_000M1_scaffold_121_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26262..26786)
DNA (525bp) protein (175aa)
Phosphoglycerate mutase family protein n=2 Tax=Parabacteroides merdae RepID=A7AKL9_9PORP
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EDN84541.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Phosphoglycerate mutase
L2_057_000M1_scaffold_121_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27064..27381)
DNA (318bp) protein (106aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AKL8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84540.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_121_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27396..28289)
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6AV32_9PORP
Putative chaperone protein DnaJ {ECO:0000313|EMBL:EDN84539.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
chaperone DnAJ
L2_057_000M1_scaffold_121_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28354..28524
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AKL6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84538.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_057_000M1_scaffold_121_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28620..28844
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AKL5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84537.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_121_28
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29539..29901)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6R8P5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA51986.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
L2_057_000M1_scaffold_121_29
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30056..30304
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YMK0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS17530.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
L2_057_000M1_scaffold_121_30
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30679..30858
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZDD5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09411.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
Displaying items 1-30 of 83 in total

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