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L2_057_000M1_scaffold_178

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_178_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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171..443
DNA (273bp) protein (91aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I3HL96_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY91249.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative lipoprotein
L2_057_000M1_scaffold_178_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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845..2341
DNA (1497bp) protein (499aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
2-isopropylmalate synthase n=13 Tax=Bacteroides RepID=E1WUL0_BACF6
2-isopropylmalate synthase LeuA
L2_057_000M1_scaffold_178_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2389..3783
DNA (1395bp) protein (465aa)
leuC; putative 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
3-isopropylmalate dehydratase large subunit n=10 Tax=Bacteroides RepID=LEUC_BACFN
L2_057_000M1_scaffold_178_4
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3783..3887
DNA (105bp) protein (35aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=C6I7I6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD43823.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_057_000M1_scaffold_178_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3896..4486
DNA (591bp) protein (197aa)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
3-isopropylmalate dehydratase, small subunit n=3 Tax=Bacteroides RepID=C6I7I5_9BACE
leuD; putative 3-isopropylmalate dehydratase small subunit
L2_057_000M1_scaffold_178_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4465..5994
DNA (1530bp) protein (510aa)
2-isopropylmalate synthase LeuA n=13 Tax=Bacteroides RepID=Q64QP3_BACFR
2-isopropylmalate synthase LeuA
Uncharacterized protein {ECO:0000313|EMBL:EKA85785.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L2_057_000M1_scaffold_178_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6007..7068
DNA (1062bp) protein (354aa)
leuB; putative 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; 3-isopropylmalate dehydrogenase; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
3-isopropylmalate dehydrogenase n=10 Tax=Bacteroides RepID=LEU3_BACFN
L2_057_000M1_scaffold_178_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7286..8020
DNA (735bp) protein (245aa)
Dolichol-phosphate mannosyltransferase n=11 Tax=Bacteroides RepID=Q64QP5_BACFR
putative glycosyl transferase
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EYE45442.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L2_057_000M1_scaffold_178_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8025..8672
DNA (648bp) protein (216aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C6I7I1_9BACE
putative transport-related, membrane protein
Lipid A Biosynthesis N-terminal domain protein {ECO:0000313|EMBL:EYB08734.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L2_057_000M1_scaffold_178_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8662..10215
DNA (1554bp) protein (518aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C6I7I0_9BACE
hypothetical protein
Dolichyl-phosphate-mannose-mannosyltransferase family protein {ECO:0000313|EMBL:EXZ82144.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
L2_057_000M1_scaffold_178_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10229..11239
DNA (1011bp) protein (337aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C6I7H9_9BACE
putative UDP-glucuronic acid epimerase
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:EYA21742.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L2_057_000M1_scaffold_178_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12112..15291
DNA (3180bp) protein (1060aa)
SusC/RagA family TonB-linked outer membrane protein n=6 Tax=Bacteroides RepID=C6I7H8_9BACE
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:EXZ77770.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
hypothetical protein
L2_057_000M1_scaffold_178_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15304..16923
DNA (1620bp) protein (540aa)
SusD family protein n=9 Tax=Bacteroides RepID=D1JSA5_9BACE
hypothetical protein
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:EXZ77769.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L2_057_000M1_scaffold_178_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17145..18161)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=E1WUJ9_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD50178.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L2_057_000M1_scaffold_178_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18211..20349)
DNA (2139bp) protein (713aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1FXK4_BACFG
TonB dependent receptor family protein {ECO:0000313|EMBL:EYB08727.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
putative outer membrane protein
L2_057_000M1_scaffold_178_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20440..20907
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9RT27_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY45803.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L2_057_000M1_scaffold_178_17
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20946..21611)
DNA (666bp) protein (222aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=C6I7H3_9BACE
hypothetical protein
PAP2 family protein {ECO:0000313|EMBL:EEZ24952.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L2_057_000M1_scaffold_178_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21636..23474)
DNA (1839bp) protein (613aa)
Uncharacterized protein n=5 Tax=Bacteroides fragilis RepID=I3HL78_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY45801.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
putative sulfatase
L2_057_000M1_scaffold_178_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23565..24515
DNA (951bp) protein (317aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
Cysteine synthase A n=2 Tax=Bacteroides fragilis RepID=I9JXH8_BACFG
putative cysteine synthase
L2_057_000M1_scaffold_178_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24590..25441
DNA (852bp) protein (284aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=Q64QQ9_BACFR
putative TPR repeat domain exported protein
Uncharacterized protein {ECO:0000313|EMBL:EIY91229.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_057_000M1_scaffold_178_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25836..27641)
DNA (1806bp) protein (602aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EXZ18325.1}; EC=3.6.4.12 {ECO:0000313|EMBL:EXZ18325.1};; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
ATP-dependent DNA helicase RecQ n=4 Tax=Bacteroides RepID=Q64QR1_BACFR
ATP-dependent DNA helicase RecQ
L2_057_000M1_scaffold_178_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27875..28339
DNA (465bp) protein (155aa)
AraC/XylS family transcriptional regulator n=14 Tax=Bacteroides RepID=Q64QR2_BACFR
putative AraC-family regulatory protein
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EYE43123.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L2_057_000M1_scaffold_178_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28432..30483
DNA (2052bp) protein (684aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LUQ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY45796.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
putative membrane attached peptidase
L2_057_000M1_scaffold_178_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30487..31149
DNA (663bp) protein (221aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=E1WUJ0_BACF6
hypothetical protein
DNA alkylation repair enzyme family protein {ECO:0000313|EMBL:EXY89532.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_057_000M1_scaffold_178_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(31247..32914)
DNA (1668bp) protein (556aa)
Putative membrane protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LAD3_BACFN
Putative membrane protein {ECO:0000313|EMBL:CAH08940.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
hypothetical protein
L2_057_000M1_scaffold_178_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33010..33498
DNA (489bp) protein (163aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=C6I7G3_9BACE
putative iron storage-related regulatory protein
Ferric uptake regulator family protein {ECO:0000313|EMBL:EYE45422.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L2_057_000M1_scaffold_178_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33495..34766
DNA (1272bp) protein (424aa)
purA; putative adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
Adenylosuccinate synthetase n=15 Tax=Bacteroides RepID=PURA_BACFN
L2_057_000M1_scaffold_178_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34904..36208
DNA (1305bp) protein (435aa)
Alpha-L-fucosidase n=4 Tax=Bacteroides RepID=Q64QR8_BACFR
putative exported alpha-L-fucosidase protein
Alpha-L-fucosidase family protein {ECO:0000313|EMBL:EYA18060.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L2_057_000M1_scaffold_178_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36327..37013
DNA (687bp) protein (229aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q64QR9_BACFR
hypothetical protein
Neutral zinc metallopeptidase family protein {ECO:0000313|EMBL:EXZ82123.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
L2_057_000M1_scaffold_178_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37487..38461
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64QS0_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD50161.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
Displaying items 1-30 of 50 in total

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