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L2_057_000M1_scaffold_193

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_193_1
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(84..488)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZJG2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA39798.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L2_057_000M1_scaffold_193_2
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(730..2004)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZLX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA39800.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Predicted ATPase (AAA+ superfamily)
L2_057_000M1_scaffold_193_3
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2321..4075
DNA (1755bp) protein (585aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Eubacterium eligens CAG:72 RepID=R6AF83_9FIRM
1-deoxy-D-xylulose-5-phosphate synthase
L2_057_000M1_scaffold_193_4
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4485..5687)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z464_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR71548.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L2_057_000M1_scaffold_193_5
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5677..6588)
DNA (912bp) protein (304aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Dihydroorotate dehydrogenase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZZC6_9FIRM
dihydroorotate dehydrogenase 1B
L2_057_000M1_scaffold_193_6
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6588..7388)
DNA (801bp) protein (267aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Eubacterium eligens CAG:72 RepID=R6AFA3_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
dihydroorotate dehydrogenase electron transfer subunit
L2_057_000M1_scaffold_193_7
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7428..8351)
DNA (924bp) protein (308aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZTT7_9FIRM
orotidine-5-phosphate decarboxylase
L2_057_000M1_scaffold_193_8
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8397..9719)
DNA (1323bp) protein (441aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Dihydroorotase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZLZ9_9FIRM
dihydroorotase
L2_057_000M1_scaffold_193_9
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9716..11839)
DNA (2124bp) protein (708aa)
Histidine ammonia-lyase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZTU5_9FIRM
Histidine ammonia-lyase {ECO:0000313|EMBL:CDA39829.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
histidine ammonia-lyase
L2_057_000M1_scaffold_193_10
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12024..12545
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZM04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA39830.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L2_057_000M1_scaffold_193_11
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12611..13375)
DNA (765bp) protein (255aa)
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZZD7_9FIRM
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:CDA39831.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
2-deoxy-D-gluconate 3-dehydrogenase
L2_057_000M1_scaffold_193_12
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13400..14425)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R6AFB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA39832.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L2_057_000M1_scaffold_193_13
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14438..16204)
DNA (1767bp) protein (589aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Arginine--tRNA ligase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZJJ8_9FIRM
argS; arginyl-tRNA synthetase
L2_057_000M1_scaffold_193_14
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16226..16963)
DNA (738bp) protein (246aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
tRNA pseudouridine synthase A n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZTV0_9FIRM
tRNA-pseudouridine synthase I
L2_057_000M1_scaffold_193_15
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16963..17328)
DNA (366bp) protein (122aa)
Two-component system chemotaxis family response regulator CheY n=1 Tax=Eubacterium eligens CAG:72 RepID=R6AFB5_9FIRM
Two-component system chemotaxis family response regulator CheY {ECO:0000313|EMBL:CDA39837.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
chemotaxis protein CheY
L2_057_000M1_scaffold_193_16
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17343..17981)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZM13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA39840.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L2_057_000M1_scaffold_193_17
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18116..19576)
DNA (1461bp) protein (487aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZZE5_9FIRM
malate dehydrogenase
L2_057_000M1_scaffold_193_18
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19736..20242)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R6AFB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA39842.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L2_057_000M1_scaffold_193_19
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20323..21948)
DNA (1626bp) protein (542aa)
60 kDa chaperonin n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZJK8_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
chaperonin GroEL
L2_057_000M1_scaffold_193_20
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22020..22385)
DNA (366bp) protein (122aa)
10 kDa chaperonin n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3R3_EUBE2
chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L2_057_000M1_scaffold_193_21
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22489..23352)
DNA (864bp) protein (288aa)
N-glycosylase/DNA lyase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZM17_9FIRM
N-glycosylase/DNA lyase {ECO:0000313|EMBL:CDA39845.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
N-glycosylase/DNA lyase
L2_057_000M1_scaffold_193_22
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23441..24523
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZZF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA39846.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L2_057_000M1_scaffold_193_23
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24584..25366)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z3R0_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR71529.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L2_057_000M1_scaffold_193_24
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25394..25783)
DNA (390bp) protein (130aa)
Spore coat protein JC n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZJL3_9FIRM
Spore coat protein JC {ECO:0000313|EMBL:CDA39848.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
spore coat protein JC
L2_057_000M1_scaffold_193_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25882..26979)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BA96_9FIRM
Glycosyl hydrolases 25 family protein {ECO:0000313|EMBL:EQJ56212.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
glycoside hydrolase family 25-like lysozyme/endolysin
L2_057_000M1_scaffold_193_26
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26981..27433)
DNA (453bp) protein (151aa)
Protein UtxA n=1 Tax=Clostridium sp. CAG:590 RepID=R5EEE0_9CLOT
Protein UtxA {ECO:0000313|EMBL:CCX89694.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
hypothetical protein
L2_057_000M1_scaffold_193_27
unknown

Not on your lists

comp(27542..27721)
DNA (180bp) protein (60aa)

This feature has no annotations

L2_057_000M1_scaffold_193_28
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27711..27851)
DNA (141bp) protein (47aa)
XkdX family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJE5_CLOSY
XkdX family protein {ECO:0000313|EMBL:EDS07408.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L2_057_000M1_scaffold_193_29
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27851..28114)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CBI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12577.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_057_000M1_scaffold_193_30
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28181..29419)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CBI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12579.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Displaying items 1-30 of 70 in total

View Taxonomy