ggKbase home page

L2_057_000M1_scaffold_197

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_197_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..913
DNA (912bp) protein (304aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides coprophilus DSM 18228 = JCM 13818 RepID=S0FCE1_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFK61293.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein
L2_057_000M1_scaffold_197_2
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

963..1424
DNA (462bp) protein (154aa)
Sigma-54 interaction domain protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTD3_9BACT
Putative fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein {ECO:0000313|EMBL:EEU52595.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Sigma-54 interaction domain-containing protein
L2_057_000M1_scaffold_197_3
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1426..2286
DNA (861bp) protein (287aa)
Sigma-54 interaction domain protein n=2 Tax=Bacteroidales RepID=S0FDC3_9BACE
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EEF78115.1}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
L2_057_000M1_scaffold_197_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2841..4565
DNA (1725bp) protein (575aa)
Single-stranded-DNA-specific exonuclease RecJ n=2 Tax=Parabacteroides merdae RepID=A7AGH4_9PORP
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EDN86230.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
single-stranded-DNA-specific exonuclease RecJ
L2_057_000M1_scaffold_197_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4686..6275
DNA (1590bp) protein (530aa)
ATP-dependent DNA helicase, RecQ family n=2 Tax=Parabacteroides merdae RepID=A7AGH3_9PORP
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:EDN86229.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RecQ familyATP-dependent DNA helicase
L2_057_000M1_scaffold_197_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6352..8157
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6C081_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13307.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_057_000M1_scaffold_197_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8154..8816
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AGH0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86226.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_197_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9099..9560)
DNA (462bp) protein (154aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AGG9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86225.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_197_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9652..9984)
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AGG8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13310.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_057_000M1_scaffold_197_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10011..10820)
DNA (810bp) protein (270aa)
Outer membrane assembly lipoprotein YfiO n=4 Tax=Parabacteroides RepID=A7AGG7_9PORP
Outer membrane assembly lipoprotein YfiO {ECO:0000313|EMBL:EDN86223.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_197_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10887..11312)
DNA (426bp) protein (142aa)
ACT domain protein n=7 Tax=Parabacteroides RepID=A7AGG6_9PORP
ACT domain protein {ECO:0000313|EMBL:EDN86222.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_197_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11410..12711)
DNA (1302bp) protein (434aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6AF83_9PORP
phenylacetate-coenzyme A ligase
L2_057_000M1_scaffold_197_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13242..15464)
DNA (2223bp) protein (741aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6BDI2_9PORP
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EDN86218.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L2_057_000M1_scaffold_197_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15561..16436)
DNA (876bp) protein (292aa)
Sec-independent protein translocase protein TatC n=4 Tax=Parabacteroides RepID=A7AGG1_9PORP
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Sec-independent protein translocase
L2_057_000M1_scaffold_197_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16440..16634)
DNA (195bp) protein (65aa)
Sec-independent protein translocase protein TatA n=7 Tax=Parabacteroides RepID=A7AGG0_9PORP
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Sec-independent protein translocase
L2_057_000M1_scaffold_197_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16776..17657
DNA (882bp) protein (294aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Malonyl CoA-acyl carrier protein transacylase n=3 Tax=Parabacteroides RepID=A7AGF8_9PORP
malonyl CoA-acyl carrier protein transacylase
L2_057_000M1_scaffold_197_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17734..19653)
DNA (1920bp) protein (640aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6B0Y7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15106.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_057_000M1_scaffold_197_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19700..22873)
DNA (3174bp) protein (1058aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AGF5_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDN86211.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_197_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23023..23406
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AGF4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86210.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
starch-binding protein
L2_057_000M1_scaffold_197_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23496..23648)
DNA (153bp) protein (51aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A3V6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15109.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_057_000M1_scaffold_197_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24608..27829
DNA (3222bp) protein (1074aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Parabacteroides merdae RepID=K6C097_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13575.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative outer membrane protein probably involved in nutrient binding
L2_057_000M1_scaffold_197_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27846..29609
DNA (1764bp) protein (588aa)
SusD family protein n=2 Tax=Parabacteroides merdae RepID=A7AGE8_9PORP
SusD family protein {ECO:0000313|EMBL:EDN86204.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_197_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30144..31142)
DNA (999bp) protein (333aa)
Peptidase, M28 family n=2 Tax=Parabacteroides merdae RepID=A7AGE6_9PORP
Peptidase, M28 family {ECO:0000313|EMBL:EDN86202.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
aminopeptidase
L2_057_000M1_scaffold_197_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31406..31564)
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZSV5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13578.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_057_000M1_scaffold_197_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31752..32294)
DNA (543bp) protein (181aa)
Carbonate dehydratase n=2 Tax=Parabacteroides merdae RepID=A7AGE4_9PORP
Carbonate dehydratase {ECO:0000313|EMBL:EDN86200.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
carbonic anhydrase
L2_057_000M1_scaffold_197_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32326..33102)
DNA (777bp) protein (259aa)
Cof-like hydrolase n=3 Tax=Parabacteroides RepID=A7AGE3_9PORP
Cof-like hydrolase {ECO:0000313|EMBL:CDD13580.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_057_000M1_scaffold_197_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33213..34388
DNA (1176bp) protein (392aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AGE1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86197.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_197_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34498..35544)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AGD9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86195.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_057_000M1_scaffold_197_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35620..36282)
DNA (663bp) protein (221aa)
HDIG domain protein n=2 Tax=Parabacteroides merdae RepID=A7AGD8_9PORP
HDIG domain protein {ECO:0000313|EMBL:EDN86194.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
metal dependent phosphohydrolase
L2_057_000M1_scaffold_197_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36491..40039)
DNA (3549bp) protein (1183aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Pyruvate-flavodoxin oxidoreductase n=3 Tax=Parabacteroides RepID=A7AGD6_9PORP
pyruvate ferredoxin/flavodoxin oxidoreductase
Displaying items 1-30 of 43 in total

View Taxonomy