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L2_057_000M1_scaffold_282

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_282_1
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(126..380)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:714 RepID=R6YX07_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD33106.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
L2_057_000M1_scaffold_282_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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493..2991
DNA (2499bp) protein (833aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
Endonuclease MutS2 n=3 Tax=Bacteroides RepID=F7LN12_9BACE
putative DNA mismatch repair MutS protein
L2_057_000M1_scaffold_282_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3004..4065
DNA (1062bp) protein (354aa)
Mg2+/Co2+ transport protein n=12 Tax=Bacteroides RepID=Q64WW0_BACFR
putative transmembrane magnesium and cobalt transporter protein
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L2_057_000M1_scaffold_282_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4122..5330
DNA (1209bp) protein (403aa)
L-serine ammonia-lyase {ECO:0000313|EMBL:EYE55316.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EYE55316.1};; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L-serine dehydratase n=10 Tax=Bacteroides RepID=Q64WW1_BACFR
putative L-serine dehydratase
L2_057_000M1_scaffold_282_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5434..5934)
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=Q5LG06_BACFN
hypothetical protein
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:EXZ29561.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
L2_057_000M1_scaffold_282_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5972..6415)
DNA (444bp) protein (148aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=Q64WW3_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY98410.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_057_000M1_scaffold_282_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6533..7087)
DNA (555bp) protein (185aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=E1WR58_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY98409.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_057_000M1_scaffold_282_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7237..7704)
DNA (468bp) protein (156aa)
Uncharacterized protein n=4 Tax=Bacteroides fragilis RepID=I3HUF6_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXZ74147.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L2_057_000M1_scaffold_282_9
Bacteroides fragilis CAG:558, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8642..9208
DNA (567bp) protein (189aa)
Alkyl hydroperoxide reductase C subunit n=15 Tax=Bacteroides RepID=Q5LG11_BACFN
alkyl hydroperoxide reductase subunit C
Alkyl hydroperoxide reductase subunit C {ECO:0000313|EMBL:CCZ37780.1}; TaxID=1263047 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:558.;"
L2_057_000M1_scaffold_282_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9309..10859
DNA (1551bp) protein (517aa)
Alkyl hydroperoxide reductase subunit F {ECO:0000313|EMBL:EXZ54667.1}; EC=1.8.1.- {ECO:0000313|EMBL:EXZ54667.1};; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
Alkyl hydroperoxide reductase subunit F n=11 Tax=Bacteroides RepID=E1WR53_BACF6
ahpF; alkyl hydroperoxide reductase subunit F
L2_057_000M1_scaffold_282_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11009..12016)
DNA (1008bp) protein (336aa)
Endonuclease/exonuclease/phosphatase family protein n=8 Tax=Bacteroides RepID=D1JJX0_9BACE
putative endonuclease/exonuclease/phosphatase family protein
Uncharacterized protein {ECO:0000313|EMBL:EKA84557.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L2_057_000M1_scaffold_282_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12089..12988)
DNA (900bp) protein (300aa)
Possible phosphodiesterase/nucleotide pyrophosphatase-like protein n=8 Tax=Bacteroides RepID=E1WR51_BACF6
phosphodiesterase/nucleotide pyrophosphatase-like protein
Type I phosphodiesterase / nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:EXZ79437.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L2_057_000M1_scaffold_282_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13030..14016)
DNA (987bp) protein (329aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=C6I4I6_9BACE
putative Icc family phosphohydrolase
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:EXY75062.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
L2_057_000M1_scaffold_282_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14104..15627)
DNA (1524bp) protein (508aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=Q5LG16_BACFN
Uncharacterized protein {ECO:0000313|EMBL:CAH06925.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
hypothetical protein
L2_057_000M1_scaffold_282_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15639..19025)
DNA (3387bp) protein (1129aa)
SusC/RagA family TonB-linked outer membrane protein n=3 Tax=Bacteroides RepID=I9KLJ0_BACFG
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIZ00990.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
putative outer membrane protein
L2_057_000M1_scaffold_282_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19198..20163)
DNA (966bp) protein (322aa)
Sigma factor regulatory protein, FecR/PupR family n=6 Tax=Bacteroides RepID=D1JJW5_9BACE
putative anti-sigma factor
FecR family protein {ECO:0000313|EMBL:EYE46758.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L2_057_000M1_scaffold_282_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20336..20461
DNA (126bp) protein (42aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=I0PYY3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY98399.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_057_000M1_scaffold_282_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20975..21877
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9RIN9_BACFG
Beta-lactamase family protein {ECO:0000313|EMBL:EYE46756.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
beta-lactamase
L2_057_000M1_scaffold_282_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22062..23063)
DNA (1002bp) protein (334aa)
Arabinan endo-1,5-alpha-L-arabinosidase A n=8 Tax=Bacteroides RepID=Q64WX7_BACFR
Glycosyl hydrolases 43 family protein {ECO:0000313|EMBL:EXZ29544.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
arabinan endo-1,5-alpha-L-arabinosidase A precursor
L2_057_000M1_scaffold_282_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23120..23665)
DNA (546bp) protein (182aa)
RNA polymerase ECF-type sigma factor n=13 Tax=Bacteroides RepID=Q64WX8_BACFR
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor, expansion 1 family protein {ECO:0000313|EMBL:EYA39940.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
L2_057_000M1_scaffold_282_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23800..26337
DNA (2538bp) protein (846aa)
Putative alpha-xylosidase n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64WX9_BACFR
Putative alpha-xylosidase {ECO:0000313|EMBL:BAD47997.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
putative alpha-xylosidase
L2_057_000M1_scaffold_282_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26809..28269
DNA (1461bp) protein (487aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
Catalase n=13 Tax=Bacteroides RepID=CATA_BACFR
catalase
L2_057_000M1_scaffold_282_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28366..29052)
DNA (687bp) protein (229aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=C6I4J7_9BACE
ktrA; putative K+/Na+ uptake protein
TrkA-N domain protein {ECO:0000313|EMBL:EYE46750.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L2_057_000M1_scaffold_282_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29068..30903)
DNA (1836bp) protein (612aa)
K+ uptake protein n=12 Tax=Bacteroides RepID=Q64WY3_BACFR
Cation transport family protein {ECO:0000313|EMBL:EYE46749.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
ktrB; putative transmembrane K+/Na+ uptake protein
L2_057_000M1_scaffold_282_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31039..32406
DNA (1368bp) protein (456aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
Pyridoxal-phosphate dependent TrpB-like enzyme n=9 Tax=Bacteroides RepID=C6I4J9_9BACE
trpB; putative tryptophan synthase beta subunit
L2_057_000M1_scaffold_282_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32535..33371
DNA (837bp) protein (279aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
Probable endonuclease 4 n=7 Tax=Bacteroides RepID=END4_BACFN
nfo; putative endonuclease IV
L2_057_000M1_scaffold_282_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33365..34936)
DNA (1572bp) protein (524aa)
Voltage-gated chloride channel protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64WY6_BACFR
Voltage-gated chloride channel protein {ECO:0000313|EMBL:BAD47990.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
voltage-gated chloride channel protein
L2_057_000M1_scaffold_282_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35399..40273
DNA (4875bp) protein (1625aa)
ATP-dependent DNA helicase, RecQ family protein {ECO:0000313|EMBL:EXY75044.1}; EC=3.6.4.12 {ECO:0000313|EMBL:EXY75044.1};; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
ATP-dependent DNA helicase, RecQ family (EC:3.6.1.-)
ATP-dependent DNA helicase, RecQ family n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JJV3_9BACE
L2_057_000M1_scaffold_282_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40352..41743
DNA (1392bp) protein (464aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Divergent AAA domain protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JJV2_9BACE
Divergent AAA domain protein {ECO:0000313|EMBL:EYE55285.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
Displaying 29 items

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