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L2_057_000M1_scaffold_288

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_288_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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748..1008
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HNH0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY93974.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
hypothetical protein
L2_057_000M1_scaffold_288_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1356..1583
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LWY5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EYA17305.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L2_057_000M1_scaffold_288_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2206..3159
DNA (954bp) protein (318aa)
putative 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
Methylenetetrahydrofolate reductase n=14 Tax=Bacteroides RepID=E1WNU3_BACF6
L2_057_000M1_scaffold_288_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3163..4272
DNA (1110bp) protein (370aa)
DNA polymerase III, delta' subunit n=2 Tax=Bacteroides fragilis RepID=I8WQV4_BACFG
putative DNA polymerase III delta subunit
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EIY40995.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L2_057_000M1_scaffold_288_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4289..5743
DNA (1455bp) protein (485aa)
Uncharacterized protein n=5 Tax=Bacteroides fragilis RepID=Q5L8K0_BACFN
hypothetical protein
Polymerase suppressor protein 1/PSP1 family protein {ECO:0000313|EMBL:EYB07759.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L2_057_000M1_scaffold_288_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5751..6191
DNA (441bp) protein (147aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=Q64NU5_BACFR
gldH; putative gliding motility protein
Gliding motility-associated lipoGldH family protein {ECO:0000313|EMBL:EXZ51999.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L2_057_000M1_scaffold_288_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6186..7643)
DNA (1458bp) protein (486aa)
Rod shape-determining protein RodA n=12 Tax=Bacteroides RepID=Q64NU4_BACFR
rod shape-determining protein RodA
Rod shape-determining protein RodA {ECO:0000313|EMBL:EIY40992.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L2_057_000M1_scaffold_288_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7624..9480)
DNA (1857bp) protein (619aa)
Penicillin-binding protein 2 n=8 Tax=Bacteroides RepID=Q64NU3_BACFR
Penicillin-binding protein 2 {ECO:0000313|EMBL:EIY40991.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
mrdA; putative penicillin-binding protein 2
L2_057_000M1_scaffold_288_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9483..9980)
DNA (498bp) protein (166aa)
Rod shape-determining protein MreD n=7 Tax=Bacteroides RepID=C6IDP6_9BACE
putative transmembrane protein
Rod shape-determining protein MreD {ECO:0000313|EMBL:EYA37241.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
L2_057_000M1_scaffold_288_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9977..10822)
DNA (846bp) protein (282aa)
Cell shape-determining protein MreC n=11 Tax=Bacteroides RepID=E1WNV0_BACF6
putative rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L2_057_000M1_scaffold_288_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10924..11946)
DNA (1023bp) protein (341aa)
Rod shape-determining protein MreB n=17 Tax=Bacteroides RepID=Q64NU0_BACFR
mreB; putative rod-shape determining protein
MreB/Mrl family cell shape determining protein {ECO:0000313|EMBL:EKA79681.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
L2_057_000M1_scaffold_288_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12021..13544)
DNA (1524bp) protein (508aa)
Phosphoribosylaminoimidazole carboxy formyl formyltransferase n=14 Tax=Bacteroides RepID=Q64NT9_BACFR
phosphoribosylaminoimidazole carboxy formyl formyltransferase
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L2_057_000M1_scaffold_288_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13696..15729)
DNA (2034bp) protein (678aa)
Peptidase family M13 n=4 Tax=Bacteroides RepID=D1JX42_9BACE
Peptidase M13 family protein {ECO:0000313|EMBL:EXZ76745.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
putative endothelin-converting enzyme
L2_057_000M1_scaffold_288_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15745..17700)
DNA (1956bp) protein (652aa)
Heme ABC exporter, ATP-binding protein CcmA {ECO:0000313|EMBL:EXY88648.1}; EC=3.6.3.41 {ECO:0000313|EMBL:EXY88648.1};; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
ABC transporter ATP-binding protein n=12 Tax=Bacteroides RepID=Q64NT7_BACFR
putative ATP-binding component of ABC transporter
L2_057_000M1_scaffold_288_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17928..20318)
DNA (2391bp) protein (797aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6IDQ2_9BACE
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:EXZ92982.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
hypothetical protein
L2_057_000M1_scaffold_288_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20528..20695)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6IDQ3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY39125.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
hypothetical protein
L2_057_000M1_scaffold_288_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21195..22097)
DNA (903bp) protein (301aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=E1WNV6_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKA85999.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L2_057_000M1_scaffold_288_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22224..24575)
DNA (2352bp) protein (784aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6IDQ6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:BAD50850.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
hypothetical protein
L2_057_000M1_scaffold_288_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24603..29147)
DNA (4545bp) protein (1515aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9JNT1_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY88869.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
hypothetical protein
L2_057_000M1_scaffold_288_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29261..31561)
DNA (2301bp) protein (767aa)
Two-component system sensor histidine kinase n=6 Tax=Bacteroides fragilis RepID=Q64NT0_BACFR
Response regulator {ECO:0000313|EMBL:EXZ92987.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
putative two-component system sensor histidine kinase/response regulator fusion protein
L2_057_000M1_scaffold_288_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31565..32890)
DNA (1326bp) protein (442aa)
MATE efflux family protein n=9 Tax=Bacteroides RepID=C6IDQ9_9BACE
MATE efflux family protein {ECO:0000313|EMBL:EXY25853.1}; TaxID=1339284 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T10.;"
putative transmembrane transport efflux protein
L2_057_000M1_scaffold_288_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32874..34136)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=C6IDR0_9BACE
putative protease
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EYE41908.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L2_057_000M1_scaffold_288_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34139..34978)
DNA (840bp) protein (280aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
Peptidyl-prolyl cis-trans isomerase n=12 Tax=Bacteroides RepID=E1WNW2_BACF6
putative peptidyl-prolyl cis-trans isomerase
L2_057_000M1_scaffold_288_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35072..36415
DNA (1344bp) protein (448aa)
Two-component system response regulator n=10 Tax=Bacteroides RepID=Q64NS6_BACFR
putative two-component response regulator transcriptional regulatory protein
AAA domain family protein {ECO:0000313|EMBL:EYE43161.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L2_057_000M1_scaffold_288_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36670..36912
DNA (243bp) protein (81aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q5L8I0_BACFN
putative lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EXY88668.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_057_000M1_scaffold_288_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37061..37726)
DNA (666bp) protein (222aa)
Ribosomal large subunit pseudouridine synthase D n=12 Tax=Bacteroides RepID=Q64NS3_BACFR
putative ribosomal large subunit pseudouridine synthase
RNA pseudouridylate synthase family protein {ECO:0000313|EMBL:EXZ76758.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L2_057_000M1_scaffold_288_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37735..38481)
DNA (747bp) protein (249aa)
fabG; putative 3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EYB07781.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EYB07781.1};; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
3-oxoacyl-[acyl-carrier protein] reductase n=12 Tax=Bacteroides RepID=Q64NS2_BACFR
L2_057_000M1_scaffold_288_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38494..39090)
DNA (597bp) protein (199aa)
Transcriptional regulator n=14 Tax=Bacteroides RepID=Q64NS1_BACFR
putative TetR-family transcriptional regulator
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EYA17332.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L2_057_000M1_scaffold_288_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39892..41415)
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1G8R7_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EYE41929.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
hypothetical protein
Displaying 29 items

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