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L2_057_000M1_scaffold_299

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_299_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..642
DNA (642bp) protein (214aa)
tRNA methylthiotransferase YqeV n=2 Tax=Parabacteroides merdae RepID=A7AD34_9PORP
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:EDN86976.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Fe-S oxidoreductase
L2_057_000M1_scaffold_299_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1031..1939
DNA (909bp) protein (303aa)
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase n=3 Tax=Parabacteroides merdae RepID=A7AD35_9PORP
Lipid A biosynthesis (KDO)2-(Lauroyl)-lipid IVA acyltransferase {ECO:0000313|EMBL:EDN86977.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acetyltransferase
L2_057_000M1_scaffold_299_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1963..3027
DNA (1065bp) protein (355aa)
Glycosyltransferase, group 2 family protein n=4 Tax=Parabacteroides RepID=A7AD36_9PORP
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDN86978.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycosyl transferase family protein
L2_057_000M1_scaffold_299_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3352..3996)
DNA (645bp) protein (215aa)
MarC family membrane protein n=6 Tax=Parabacteroides RepID=K5YKM1_9PORP
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
MarC family integral membrane protein
L2_057_000M1_scaffold_299_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4055..5299)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AD39_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86981.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_299_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5306..6751)
DNA (1446bp) protein (482aa)
4Fe-4S binding domain protein n=4 Tax=Parabacteroides RepID=A7AD40_9PORP
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDN86982.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hydrogenase
L2_057_000M1_scaffold_299_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6877..7239)
DNA (363bp) protein (121aa)
Dihydroneopterin aldolase n=2 Tax=Parabacteroides merdae RepID=A7AD41_9PORP
Dihydroneopterin aldolase {ECO:0000313|EMBL:EDN86983.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
dihydroneopterin aldolase
L2_057_000M1_scaffold_299_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7332..7688
DNA (357bp) protein (119aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AD42_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86984.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_299_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7783..9036)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AD43_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86985.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_057_000M1_scaffold_299_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9293..11977)
DNA (2685bp) protein (895aa)
4-alpha-glucanotransferase n=2 Tax=Parabacteroides merdae RepID=K6AXU7_9PORP
Putative 4-alpha-glucanotransferase {ECO:0000313|EMBL:EDN86986.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
4-alpha-glucanotransferase
L2_057_000M1_scaffold_299_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12083..14653)
DNA (2571bp) protein (857aa)
Ribonucleoside-diphosphate reductase n=3 Tax=Parabacteroides RepID=A7AD45_9PORP
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:CDD14458.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ribonucleoside reductase
L2_057_000M1_scaffold_299_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14880..16268)
DNA (1389bp) protein (463aa)
Chromosomal replication initiator protein DnaA n=7 Tax=Parabacteroides RepID=A7AD47_9PORP
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
dnaA; chromosomal replication initiation protein
L2_057_000M1_scaffold_299_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16649..17335)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WYT3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14460.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_057_000M1_scaffold_299_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17323..17532)
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7BFP4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86991.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_299_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17570..18883)
DNA (1314bp) protein (438aa)
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Parabacteroides merdae RepID=A7AD50_9PORP
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDN86992.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
N-acetylmuramoyl-L-alanine amidase amiA
L2_057_000M1_scaffold_299_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(18904..19347)
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=4 Tax=Parabacteroides RepID=A7AD51_9PORP
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
rplI; 50S ribosomal protein L9
L2_057_000M1_scaffold_299_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(19369..19638)
DNA (270bp) protein (90aa)
30S ribosomal protein S18 n=13 Tax=Bacteroidales RepID=RS18_PARD8
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_057_000M1_scaffold_299_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(19641..19994)
DNA (354bp) protein (118aa)
30S ribosomal protein S6 n=4 Tax=Parabacteroides RepID=A7AD53_9PORP
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
rpsF; 30S ribosomal protein S6
L2_057_000M1_scaffold_299_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20281..20577
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YJB9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13792.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L2_057_000M1_scaffold_299_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20585..20758)
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AD55_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86997.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_057_000M1_scaffold_299_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21017..22048
DNA (1032bp) protein (344aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AD57_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86999.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
lysophospholipase
L2_057_000M1_scaffold_299_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22161..23642
DNA (1482bp) protein (494aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AD58_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87000.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_299_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23644..24381)
DNA (738bp) protein (246aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Acyltransferase n=2 Tax=Parabacteroides merdae RepID=A7AD59_9PORP
1-acyl-sn-glycerol-3-phosphate acyltransferase
L2_057_000M1_scaffold_299_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24519..24689
DNA (171bp) protein (57aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=A7AD60_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87002.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_299_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24755..25063)
DNA (309bp) protein (103aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AD61_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87003.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional accessory protein
L2_057_000M1_scaffold_299_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25402..26283)
DNA (882bp) protein (294aa)
Transcriptional regulator, AraC family n=3 Tax=Parabacteroides merdae RepID=A7AD62_9PORP
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDN87004.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L2_057_000M1_scaffold_299_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26289..27152)
DNA (864bp) protein (288aa)
Endonuclease/exonuclease/phosphatase family protein n=3 Tax=Parabacteroides RepID=A7AD63_9PORP
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:CDD13964.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_057_000M1_scaffold_299_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27280..31566)
DNA (4287bp) protein (1429aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=4 Tax=Parabacteroides RepID=A7AD64_9PORP
L2_057_000M1_scaffold_299_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31640..35452)
DNA (3813bp) protein (1271aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=4 Tax=Parabacteroides RepID=A7AD65_9PORP
L2_057_000M1_scaffold_299_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(35560..35937)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=6 Tax=Parabacteroides RepID=A7AD66_9PORP
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
rplL; 50S ribosomal protein L7/L12
Displaying items 1-30 of 36 in total

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