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L2_057_000M1_scaffold_370

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_370_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..176
DNA (174bp) protein (58aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Deoxycytidylate deaminase {ECO:0000313|EMBL:CBK99715.1}; EC=3.5.4.12 {ECO:0000313|EMBL:CBK99715.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Deoxycytidylate deaminase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0B6_9FIRM
L2_057_000M1_scaffold_370_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(391..2475)
DNA (2085bp) protein (695aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Putative translation elongation factor G n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H269_9FIRM
Putative translation elongation factor G {ECO:0000313|EMBL:EEU97782.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_057_000M1_scaffold_370_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3095..3583
DNA (489bp) protein (163aa)
Sigma-70 region 2 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H274_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EEU97787.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
RNA polymerase sigma factor, sigma-70 family
L2_057_000M1_scaffold_370_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3570..4634
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0B1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99710.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_057_000M1_scaffold_370_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5056..6009
DNA (954bp) protein (318aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Pyruvate kinase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8H0_9FIRM
Pyruvate kinase
L2_057_000M1_scaffold_370_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6136..6690
DNA (555bp) protein (185aa)
BioY family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SD96_9FIRM
BioY family protein {ECO:0000313|EMBL:EDP20832.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L2_057_000M1_scaffold_370_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6792..7847)
DNA (1056bp) protein (352aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Ornithine carbamoyltransferase n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAP1_9FIRM
L2_057_000M1_scaffold_370_8
unknown

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7883..8140
DNA (258bp) protein (86aa)

This feature has no annotations

L2_057_000M1_scaffold_370_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8160..8645
DNA (486bp) protein (162aa)
Transcription elongation factor GreA n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0B9_9FIRM
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_057_000M1_scaffold_370_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8672..10183
DNA (1512bp) protein (504aa)
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Lysine--tRNA ligase n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAM8_9FIRM
L2_057_000M1_scaffold_370_11
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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10439..12319
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y5V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL03482.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
hypothetical protein
L2_057_000M1_scaffold_370_12
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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12316..13557
DNA (1242bp) protein (414aa)
endonuclease VII n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B78BF7
Uncharacterized protein {ECO:0000313|EMBL:ESL03481.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
hypothetical protein
L2_057_000M1_scaffold_370_13
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13569..13961
DNA (393bp) protein (131aa)
Cell wall assembly/cell proliferation coordinating protein, KNR4-like protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UJN0_RUMA7
Cell wall assembly/cell proliferation coordinating protein, KNR4-like protein
Cell wall assembly/cell proliferation coordinating protein, KNR4-like protein {ECO:0000313|EMBL:ADU23876.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L2_057_000M1_scaffold_370_14
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14161..15738)
DNA (1578bp) protein (526aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Glycerol kinase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VIC6_9CLOT
glycerol kinase
L2_057_000M1_scaffold_370_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15735..16985)
DNA (1251bp) protein (417aa)
ROK family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN99_9FIRM
ROK family protein {ECO:0000313|EMBL:EEQ59611.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
putative NAGC-like transcriptional regulator
L2_057_000M1_scaffold_370_16
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17196..18536)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QGJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29991.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_057_000M1_scaffold_370_17
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18556..20124)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PZX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29993.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_057_000M1_scaffold_370_18
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20128..20598)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q2K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29995.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_057_000M1_scaffold_370_19
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20725..21783)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R6H4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29997.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_057_000M1_scaffold_370_20
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21852..22613)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q001_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29998.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_057_000M1_scaffold_370_21
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22617..24626)
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QAF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29999.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
alpha-glucosidase
L2_057_000M1_scaffold_370_22
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24708..25373)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q2M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30000.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_057_000M1_scaffold_370_23
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25387..26244)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QGN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30001.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
3-hydroxyisobutyrate dehydrogenase
L2_057_000M1_scaffold_370_24
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26260..26952)
DNA (693bp) protein (231aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HH19_9CLOT
putative transaldolase
L2_057_000M1_scaffold_370_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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27583..28533
DNA (951bp) protein (317aa)
Glycyl-radical enzyme activating protein family protein {ECO:0000313|EMBL:EFC97858.1}; EC=1.97.1.- {ECO:0000313|EMBL:EFC97858.1};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
glycerol dehydratase, cobalamin-independent, small subunit (EC:1.97.1.4 4.2.1.30)
Glycyl-radical enzyme activating protein family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AJZ7_9CLOT
L2_057_000M1_scaffold_370_26
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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28555..31038
DNA (2484bp) protein (828aa)
PFL2/glycerol dehydratase family glycyl radical enzyme n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XQT4_9CLOT
PFL2/glycerol dehydratase family glycyl radical enzyme {ECO:0000313|EMBL:EOS39491.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
PFL2/glycerol dehydratase family glycyl radical enzyme
L2_057_000M1_scaffold_370_27
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31056..32204
DNA (1149bp) protein (383aa)
Alcohol dehydrogenase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QAA9_9FIRM
Alcohol dehydrogenase {ECO:0000313|EMBL:CDC29979.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
iron-containing alcohol dehydrogenase
L2_057_000M1_scaffold_370_28
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32391..32936
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BN50_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA62429.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
Displaying 28 items

View Taxonomy