ggKbase home page

L2_057_000M1_scaffold_377

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_377_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..899)
DNA (897bp) protein (299aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
tRNA-dihydrouridine synthase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KZS5_BACV8
nifR3 family TIM-barrel protein
L2_057_000M1_scaffold_377_2
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

958..1365
DNA (408bp) protein (136aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=A6KZS4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV69095.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_057_000M1_scaffold_377_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1362..2477
DNA (1116bp) protein (372aa)
Putative DNA processing Smf-like protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KZS3_BACV8
DNA processing Smf-like protein
Putative DNA processing Smf-like protein {ECO:0000313|EMBL:ABR38937.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_057_000M1_scaffold_377_4
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2558..4441)
DNA (1884bp) protein (628aa)
Glycoside hydrolase family 29 n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P369_9BACE
Glycoside hydrolase family 29 {ECO:0000313|EMBL:CDF19491.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
glycoside hydrolase
L2_057_000M1_scaffold_377_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4489..4608
DNA (120bp) protein (40aa)
Conserved domain protein n=4 Tax=Bacteroides RepID=D4V9Y1_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY79566.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_057_000M1_scaffold_377_6
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5036..6403
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P5B9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF19493.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L2_057_000M1_scaffold_377_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6370..7365
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=root RepID=I9UBU7_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY79568.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L2_057_000M1_scaffold_377_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7414..8397
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=root RepID=R7P3P3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS52839.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L2_057_000M1_scaffold_377_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8896..9756
DNA (861bp) protein (287aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8ZVJ6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS02869.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
transcriptional regulator
L2_057_000M1_scaffold_377_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9821..10576)
DNA (756bp) protein (252aa)
succinate dehydrogenase/fumarate reductase iron-sulfur subunit (EC:1.3.99.1)
Fumarate reductase iron-sulfur cluster protein subunit n=15 Tax=Bacteroides RepID=A6KZR7_BACV8
2Fe-2S iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:KDS33806.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_057_000M1_scaffold_377_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10597..12555)
DNA (1959bp) protein (653aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
Fumarate reductase flavoprotein subunit n=7 Tax=Bacteroides RepID=A6KZR6_BACV8
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:KDS33807.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_057_000M1_scaffold_377_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12590..13276)
DNA (687bp) protein (229aa)
Succinate dehydrogenase cytochrome B subunit, b558 family n=7 Tax=Bacteroides RepID=C6YZK0_9BACE
cytochrome B subunit
B558 family succinate dehydrogenase (Or fumarate reductase) cytochrome B subunit {ECO:0000313|EMBL:EIY79573.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_057_000M1_scaffold_377_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13467..14078
DNA (612bp) protein (204aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6KZR4_BACV8
hypothetical protein
PAP2 superfamily protein {ECO:0000313|EMBL:KDS33809.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_057_000M1_scaffold_377_14
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14182..15783)
DNA (1602bp) protein (534aa)
Peptidase, S41 family {ECO:0000313|EMBL:EET14070.1}; EC=3.4.21.- {ECO:0000313|EMBL:EET14070.1};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Peptidase, S41 family n=4 Tax=Bacteroides RepID=C6YZK2_9BACE
carboxy-terminal processing protease
L2_057_000M1_scaffold_377_15
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15786..16241)
DNA (456bp) protein (152aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Phosphopantetheine adenylyltransferase n=2 Tax=Bacteroides RepID=D4V9Z1_BACVU
L2_057_000M1_scaffold_377_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16259..18136)
DNA (1878bp) protein (626aa)
DNA topoisomerase IV subunit B n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KZR1_BACV8
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:ABR38925.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
DNA topoisomerase IV subunit B
L2_057_000M1_scaffold_377_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18167..19303)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A6KZR0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY79580.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_057_000M1_scaffold_377_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19378..20340)
DNA (963bp) protein (321aa)
Na+/Ca2+ exchanger protein n=12 Tax=Bacteroides RepID=E5UNN5_9BACE
sodium:proton exchanger
Inner membrane protein {ECO:0000313|EMBL:EOS02860.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_057_000M1_scaffold_377_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20404..21375)
DNA (972bp) protein (324aa)
Acid phosphatase n=5 Tax=Bacteroides RepID=A6KZQ8_BACV8
acid phosphatase
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:KDS33815.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_057_000M1_scaffold_377_20
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21386..24154)
DNA (2769bp) protein (923aa)
TonB-dependent receptor n=5 Tax=Bacteroides RepID=C6YZK8_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:EET14076.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
TonB-dependent outer membrane receptor protein
L2_057_000M1_scaffold_377_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24712..25191)
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KZQ6_BACV8
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:KDS33818.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_057_000M1_scaffold_377_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25275..28298)
DNA (3024bp) protein (1008aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZVK8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS52823.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L2_057_000M1_scaffold_377_23
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28343..28837)
DNA (495bp) protein (165aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6KZQ0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF19237.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_057_000M1_scaffold_377_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29650..30588)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P2M8_9BACE
Phage integrase family protein {ECO:0000313|EMBL:KDS47817.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
integrase
L2_057_000M1_scaffold_377_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30796..31815
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9UBW8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY79588.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L2_057_000M1_scaffold_377_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31818..32615
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9J003_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY79589.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L2_057_000M1_scaffold_377_27
unknown

Not on your lists

comp(32639..32707)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 27 items

View Taxonomy