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L2_057_000M1_scaffold_392

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_392_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1044)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GTB6_9BIFI
hypothetical protein
Diguanylate cyclase {ECO:0000313|EMBL:KIM01396.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE05180.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_057_000M1_scaffold_392_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1237..2850)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=2 Tax=Bifidobacterium adolescentis RepID=A0ZZS9_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF38962.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L2_057_000M1_scaffold_392_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3251..3940)
DNA (690bp) protein (230aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=LEUD_BIFAA
isopropylmalate isomerase small subunit
L2_057_000M1_scaffold_392_4
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4030..5433)
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
3-isopropylmalate dehydratase large subunit n=2 Tax=Bifidobacterium adolescentis RepID=LEUC_BIFAA
3-isopropylmalate dehydratase large subunit
L2_057_000M1_scaffold_392_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5780..6574
DNA (795bp) protein (265aa)
IclR-type transcriptional regulator n=3 Tax=Bifidobacterium RepID=A0ZZS6_BIFAA
IclR-type transcriptional regulator
IclR-type transcriptional regulator {ECO:0000313|EMBL:AII75612.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_057_000M1_scaffold_392_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6727..8190)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZS5_BIFAA
Serine/threonine protein phosphatase {ECO:0000313|EMBL:KIM01400.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L2_057_000M1_scaffold_392_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8742..10271)
DNA (1530bp) protein (510aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Glutamate--tRNA ligase n=2 Tax=root RepID=R5H247_9BIFI
glutamyl-tRNA synthetase
L2_057_000M1_scaffold_392_8
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10430..11701
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3J1_BIFAD
Membrane protein {ECO:0000313|EMBL:KFI96354.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L2_057_000M1_scaffold_392_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11961..13022)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3I9_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN83472.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L2_057_000M1_scaffold_392_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13106..13765)
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Bifidobacterium adolescentis RepID=A0ZZS1_BIFAA
hypothetical protein
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EDN83471.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L2_057_000M1_scaffold_392_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14144..15568
DNA (1425bp) protein (475aa)
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3I7_BIFAD
MFS transporter {ECO:0000313|EMBL:KIM01405.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L2_057_000M1_scaffold_392_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15727..16263)
DNA (537bp) protein (179aa)
GtrA-like protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3I6_BIFAD
Sugar translocase {ECO:0000313|EMBL:KIM01414.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
membrane spanning protein with GtrA-like domain
L2_057_000M1_scaffold_392_13
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16371..16718
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A3I5_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY19016.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L2_057_000M1_scaffold_392_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17157..18674)
DNA (1518bp) protein (506aa)
Formate--tetrahydrofolate ligase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3I4_BIFAD
formate-tetrahydrofolate ligase
Formate-tetrahydrofolate ligase {ECO:0000313|EMBL:AII75603.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_057_000M1_scaffold_392_15
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18939..20531)
DNA (1593bp) protein (531aa)
Dipeptidase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3I1_BIFAD
Dipeptidase {ECO:0000313|EMBL:KFI96347.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
dipeptidase
L2_057_000M1_scaffold_392_16
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20640..21197)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZR5_BIFAA
hypothetical protein
Raf-like protein {ECO:0000313|EMBL:KFI96346.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_057_000M1_scaffold_392_17
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21471..23120)
DNA (1650bp) protein (550aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZR4_BIFAA
PTS system, enzyme I
L2_057_000M1_scaffold_392_18
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23464..23724
DNA (261bp) protein (87aa)
Phosphocarrier, HPr family n=2 Tax=Bifidobacterium RepID=A7A3H7_BIFAD
phosphocarrier protein HPr
HPr family phosphocarrier {ECO:0000313|EMBL:KFI96344.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L2_057_000M1_scaffold_392_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23954..25009
DNA (1056bp) protein (352aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3H6_BIFAD
putative LacI-family transcriptional regulator
Putative LacI-family transcriptional regulator {ECO:0000313|EMBL:AJE05159.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L2_057_000M1_scaffold_392_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25052..26200)
DNA (1149bp) protein (383aa)
Putative DNA polymerase III, delta' subunit n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A3H5_BIFAD
DNA polymerase III subunit delta {ECO:0000313|EMBL:KIM01779.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
putative DNA polymerase III delta prime subunit
L2_057_000M1_scaffold_392_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26197..26850)
DNA (654bp) protein (218aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165, ECO:0000256|SAAS:SAAS00031932};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Thymidylate kinase n=2 Tax=Bifidobacterium adolescentis RepID=KTHY_BIFAA
thymidylate kinase
L2_057_000M1_scaffold_392_22
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26972..30049)
DNA (3078bp) protein (1026aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
DNA topoisomerase 1 n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GQM5_9BIFI
topA; DNA topoisomerase I
L2_057_000M1_scaffold_392_23
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30161..31201)
DNA (1041bp) protein (347aa)
PAP2 family protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GR65_9BIFI
Pre-pilin peptidase {ECO:0000313|EMBL:KFI96340.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
putative pre-pilin peptidase
L2_057_000M1_scaffold_392_24
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31536..31631
DNA (96bp) protein (32aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:KFI96339.1}; EC=5.4.99.9 {ECO:0000313|EMBL:KFI96339.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Probable UDP-galactopyranose mutase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A0ZZQ7_BIFAA
gif; UDP-galactopyranose mutase
Displaying 24 items

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