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L2_057_000M1_scaffold_424

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_424_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(96..1901)
DNA (1806bp) protein (602aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC59_9FIRM
HAMP domain protein
L2_057_000M1_scaffold_424_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2315..3553)
DNA (1239bp) protein (413aa)
Galactokinase (EC:2.7.1.6)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77354.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_057_000M1_scaffold_424_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3957..4853
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77355.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, AraC family
L2_057_000M1_scaffold_424_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5134..7191)
DNA (2058bp) protein (686aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Beta-galactosidase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC62_9FIRM
beta-galactosidase
L2_057_000M1_scaffold_424_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7214..9001)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77357.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
multi-sensor signal transduction histidine kinase
L2_057_000M1_scaffold_424_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9003..9833)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77358.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
two component transcriptional regulator, arac family
L2_057_000M1_scaffold_424_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9909..10745)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77359.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC transporter periplasmic subunit-2
L2_057_000M1_scaffold_424_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10759..11637)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77360.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
binding-protein-dependent transport system inner membrane component
L2_057_000M1_scaffold_424_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11711..13021)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77361.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
extracellular solute-binding protein, family 1
L2_057_000M1_scaffold_424_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13268..15346)
DNA (2079bp) protein (693aa)
Beta-galactosidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77362.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_057_000M1_scaffold_424_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15554..16348)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77363.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
AraC-type DNA-binding protein, response regulator
L2_057_000M1_scaffold_424_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16711..17352)
DNA (642bp) protein (214aa)
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC76_9FIRM
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EES77370.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_057_000M1_scaffold_424_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17366..18436)
DNA (1071bp) protein (357aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77371.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_057_000M1_scaffold_424_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18467..20212)
DNA (1746bp) protein (582aa)
Dihydroxyacid dehydratase/phosphogluconate dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC78_9FIRM
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:EES77372.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_057_000M1_scaffold_424_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20523..21257)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77373.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, GntR family
L2_057_000M1_scaffold_424_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21268..22200)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77374.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional regulator
L2_057_000M1_scaffold_424_17
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22570..23649
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D70EB8
Sugar diacid utilization regulator
Sugar diacid utilization regulator {ECO:0000313|EMBL:CBK79100.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_057_000M1_scaffold_424_18
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23668..24927)
DNA (1260bp) protein (420aa)
gluconate:proton symporter n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E4D161
Uncharacterized protein {ECO:0000313|EMBL:EOS51821.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
permease, GntP family
L2_057_000M1_scaffold_424_19
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24931..26076)
DNA (1146bp) protein (382aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase {ECO:0000313|EMBL:CBK79101.1}; EC=2.7.1.31 {ECO:0000313|EMBL:CBK79101.1};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
glycerate kinase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D462BF
L2_057_000M1_scaffold_424_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26373..26756)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77531.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_057_000M1_scaffold_424_21
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

26962..28557
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C374_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD72405.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L2_057_000M1_scaffold_424_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28738..28968
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77532.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Na+/H+-dicarboxylate symporters
Displaying 22 items

View Taxonomy