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L2_057_000M1_scaffold_440

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_440_1
unknown

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)

This feature has no annotations

L2_057_000M1_scaffold_440_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

200..550
DNA (351bp) protein (117aa)
LrgA family protein n=3 Tax=Parabacteroides RepID=A7AJ18_9PORP
LrgA family protein {ECO:0000313|EMBL:EDN85385.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_440_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

543..1241
DNA (699bp) protein (233aa)
TIGR00659 family protein n=3 Tax=Parabacteroides merdae RepID=K6AE31_9PORP
Putative TIGR00659 family protein {ECO:0000313|EMBL:EDN85386.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_440_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1432..1995
DNA (564bp) protein (188aa)
Elongation factor P n=7 Tax=Parabacteroides RepID=A7AJ20_9PORP
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
elongation factor P
L2_057_000M1_scaffold_440_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2081..2761
DNA (681bp) protein (227aa)
DNA repair protein RadC n=3 Tax=Parabacteroides RepID=A7AJ21_9PORP
DNA repair protein RadC {ECO:0000313|EMBL:CDD14384.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
DNA repair protein
L2_057_000M1_scaffold_440_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2916..3233
DNA (318bp) protein (106aa)
FeS assembly SUF system protein n=3 Tax=Parabacteroides RepID=K6A6H4_9PORP
Putative FeS assembly SUF system protein {ECO:0000313|EMBL:EDN85389.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_440_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3238..4014
DNA (777bp) protein (259aa)
Ser/Thr phosphatase family protein n=2 Tax=Parabacteroides merdae RepID=A7AJ23_9PORP
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EDN85390.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
UDP-2,3-diacylglucosamine hydrolase
L2_057_000M1_scaffold_440_8
unknown

Not on your lists

comp(4111..4341)
DNA (231bp) protein (77aa)

This feature has no annotations

L2_057_000M1_scaffold_440_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4607..5806)
DNA (1200bp) protein (400aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Acetate kinase n=4 Tax=Parabacteroides RepID=A7AJ25_9PORP
acetate kinase
L2_057_000M1_scaffold_440_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5892..6905)
DNA (1014bp) protein (338aa)
Phosphate acetyltransferase n=5 Tax=Parabacteroides RepID=A7AJ26_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14389.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
phosphotransacetylase/phosphate acetyltransferase
L2_057_000M1_scaffold_440_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7038..7823)
DNA (786bp) protein (262aa)
TIGR00159 family protein n=3 Tax=Parabacteroides RepID=A7AJ27_9PORP
TIGR00159 family protein {ECO:0000313|EMBL:CDD14390.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_057_000M1_scaffold_440_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7828..8688)
DNA (861bp) protein (287aa)
Dihydropteroate synthase n=3 Tax=Parabacteroides merdae RepID=A7AJ28_9PORP
Dihydropteroate synthase {ECO:0000313|EMBL:EKN13986.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
dihydropteroate synthase
L2_057_000M1_scaffold_440_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8785..10071
DNA (1287bp) protein (429aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Parabacteroides merdae RepID=A7AJ29_9PORP
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
L2_057_000M1_scaffold_440_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10527..10679
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AJ32_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85398.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_057_000M1_scaffold_440_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10835..12097)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AJ33_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85400.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_440_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12131..13981)
DNA (1851bp) protein (617aa)
SusD family protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AJ34_9PORP
SusD family protein {ECO:0000313|EMBL:EDN85401.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
starch-binding protein
L2_057_000M1_scaffold_440_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13992..17426)
DNA (3435bp) protein (1145aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides merdae RepID=A7AJ35_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDN85402.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
collagen-binding protein
L2_057_000M1_scaffold_440_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17574..18557)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BG44_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12553.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_057_000M1_scaffold_440_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18626..19195)
DNA (570bp) protein (190aa)
RNA polymerase sigma-70 factor n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7ACH4_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDN87514.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RNA polymerase sigma-70 factor
L2_057_000M1_scaffold_440_20
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19788..20669
DNA (882bp) protein (294aa)
Kinase, PfkB family n=5 Tax=Parabacteroides RepID=A7ACH5_9PORP
Kinase, PfkB family {ECO:0000313|EMBL:EEC98247.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
ribokinase
L2_057_000M1_scaffold_440_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20743..21954)
DNA (1212bp) protein (404aa)
L-fucose:H+ symporter permease n=3 Tax=Parabacteroides RepID=A7ACH6_9PORP
L-fucose:H+ symporter permease {ECO:0000313|EMBL:EDN87516.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
fucose permease
L2_057_000M1_scaffold_440_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21982..25377)
DNA (3396bp) protein (1132aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6B3I1_9PORP
two-component system sensor histidine kinase
L2_057_000M1_scaffold_440_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25504..25662)
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7A9J2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12548.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_057_000M1_scaffold_440_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25698..26858)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7A9J3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88300.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_440_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27274..27876
DNA (603bp) protein (201aa)
Site-specific recombinase, phage integrase family n=2 Tax=Parabacteroides merdae RepID=A7A9J6_9PORP
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDN88303.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Site-specific recombinase XerD
Displaying 25 items

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