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L2_057_000M1_scaffold_455

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_455_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8..1036)
DNA (1029bp) protein (343aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
selenide, water dikinase (EC:2.7.9.3)
Selenide, water dikinase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBJ5_9FIRM
L2_057_000M1_scaffold_455_2
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(1036..1257)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBJ6_9FIRM
Protein of uncharacterised function (DUF3343) {ECO:0000313|EMBL:CRH80026.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L2_057_000M1_scaffold_455_3
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(1250..1582)
DNA (333bp) protein (111aa)
Transcriptional regulator, LysR family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBJ7_9FIRM
DNA-binding transcriptional regulator ModE {ECO:0000313|EMBL:CRH80025.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
N-terminal domain of molybdenum-binding protein
L2_057_000M1_scaffold_455_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1579..2592)
DNA (1014bp) protein (338aa)
Molybdopterin binding domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBJ8_9FIRM
Molybdopterin binding domain protein {ECO:0000313|EMBL:EEC89828.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Molybdopterin biosynthesis enzyme
L2_057_000M1_scaffold_455_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2594..3370)
DNA (777bp) protein (259aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBJ9_9FIRM
Molybdate ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:EEC89829.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
modA; molybdate ABC transporter substrate-binding protein
L2_057_000M1_scaffold_455_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3367..3999)
DNA (633bp) protein (211aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBK0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEC89830.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ABC-type spermidine/putrescine transport systems, ATPase components
L2_057_000M1_scaffold_455_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4000..4695)
DNA (696bp) protein (232aa)
Molybdate ABC transporter, permease protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBK1_9FIRM
Molybdate ABC transporter, permease protein {ECO:0000313|EMBL:EEC89831.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
molybdate ABC transporter, permease protein
L2_057_000M1_scaffold_455_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4676..5611)
DNA (936bp) protein (312aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBK2_9FIRM
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:EEC89832.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
molybdenum cofactor synthesis domain-containing protein
L2_057_000M1_scaffold_455_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5599..6075)
DNA (477bp) protein (159aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBK3_9FIRM
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
moaC; molybdenum cofactor biosynthesis protein C
L2_057_000M1_scaffold_455_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6077..7021)
DNA (945bp) protein (315aa)
Putative molybdenum cofactor biosynthesis protein A n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBK4_9FIRM
Putative molybdenum cofactor biosynthesis protein A {ECO:0000313|EMBL:EEC89834.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
molybdenum cofactor biosynthesis protein A, bacterial
L2_057_000M1_scaffold_455_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7111..7650
DNA (540bp) protein (180aa)
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EEC89835.1}; EC=3.2.2.20 {ECO:0000313|EMBL:EEC89835.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
tag; DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBK5_9FIRM
L2_057_000M1_scaffold_455_12
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(7647..7979)
DNA (333bp) protein (111aa)
ArsC family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBK6_9FIRM
Transcriptional regulator Spx {ECO:0000313|EMBL:CRH81075.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Arsenate reductase and related proteins, glutaredoxin family
L2_057_000M1_scaffold_455_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7976..9241)
DNA (1266bp) protein (422aa)
Amidohydrolase family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBK7_9FIRM
Amidohydrolase family protein {ECO:0000313|EMBL:EEC89837.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Cytosine deaminase and related metal-dependent hydrolases
L2_057_000M1_scaffold_455_14
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9307..9738)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FP79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30396.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_057_000M1_scaffold_455_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9806..10990
DNA (1185bp) protein (395aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EEC89838.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEC89838.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Aminotransferase, class I/II n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBK8_9FIRM
aminotransferase
L2_057_000M1_scaffold_455_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11012..11527
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89839.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_057_000M1_scaffold_455_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11536..12669)
DNA (1134bp) protein (378aa)
4Fe-4S binding domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBL0_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEC89840.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Uncharacterized Fe-S center protein
L2_057_000M1_scaffold_455_18
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12746..13924
DNA (1179bp) protein (393aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EEC89841.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEC89841.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
aminotransferase (EC:2.6.1.-)
Aminotransferase, class I/II n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBL1_9FIRM
L2_057_000M1_scaffold_455_19
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14168..15619)
DNA (1452bp) protein (484aa)
Serine carboxypeptidase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBL2_9FIRM
Serine carboxypeptidase {ECO:0000313|EMBL:EEC89842.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
serine carboxypeptidase family protein
L2_057_000M1_scaffold_455_20
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15717..16853)
DNA (1137bp) protein (379aa)
PP-loop family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBL3_9FIRM
PP-loop family protein {ECO:0000313|EMBL:EEC89843.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L2_057_000M1_scaffold_455_21
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16928..18253
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DMC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81368.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
putative efflux protein, MATE family
L2_057_000M1_scaffold_455_22
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18453..19034
DNA (582bp) protein (194aa)
SNARE-like domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBL6_9FIRM
SNARE-like domain protein {ECO:0000313|EMBL:EEC89846.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_057_000M1_scaffold_455_23
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19103..19804
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBL7_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEC89847.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
vanR3; regulatory protein VanR
L2_057_000M1_scaffold_455_24
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19801..21840
DNA (2040bp) protein (680aa)
vanS3; sensor protein VanS (EC:2.7.13.3)
Histidine kinase A domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBL8_9FIRM
Histidine kinase A domain protein {ECO:0000313|EMBL:EEC89848.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_057_000M1_scaffold_455_25
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

22062..23369
DNA (1308bp) protein (436aa)
ATPase n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B3E7F8
Uncharacterised protein {ECO:0000313|EMBL:CRH76361.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L2_057_000M1_scaffold_455_26
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23389..24333)
DNA (945bp) protein (315aa)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EEC90927.1}; EC=5.3.1.8 {ECO:0000313|EMBL:EEC90927.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
pmi; mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8H1_9FIRM
L2_057_000M1_scaffold_455_27
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24422..25675
DNA (1254bp) protein (418aa)
Aluminum resistance protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBL9_9FIRM
Aluminum resistance protein {ECO:0000313|EMBL:EEC89849.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Cystathionine beta-lyase family protein involved in aluminum resistance
L2_057_000M1_scaffold_455_28
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25774..26238)
DNA (465bp) protein (155aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBM1_9FIRM
Putative 3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EEC89851.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Displaying 28 items

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