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L2_057_000M1_scaffold_462

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_462_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(357..1661)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AE12_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87304.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_462_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1732..2748
DNA (1017bp) protein (339aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides RepID=R6WLL7_9PORP
two-component system sensor histidine kinase
L2_057_000M1_scaffold_462_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2745..5429)
DNA (2685bp) protein (895aa)
Peptidase, S9A/B/C family, catalytic domain protein n=2 Tax=Parabacteroides merdae RepID=A7AE10_9PORP
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EDN87302.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acylaminoacyl-peptidase
L2_057_000M1_scaffold_462_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5529..6548
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AE09_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87301.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acyltransferase
L2_057_000M1_scaffold_462_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6803..7948)
DNA (1146bp) protein (382aa)
Antioxidant, AhpC/TSA family n=2 Tax=Parabacteroides merdae RepID=A7AE08_9PORP
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDN87300.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alkyl hydroperoxide reductase
L2_057_000M1_scaffold_462_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8088..8762)
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6BQ29_9PORP
Putative bacteriocin export ABC transporter lactococcin 972 group {ECO:0000313|EMBL:CDD12003.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative ABC transporter ATP-binding protein
L2_057_000M1_scaffold_462_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8835..9068
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZTG0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12001.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_057_000M1_scaffold_462_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9221..9994
DNA (774bp) protein (258aa)
Hydrolase, NUDIX family n=2 Tax=Parabacteroides merdae RepID=A7AE06_9PORP
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDN87298.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
NADH pyrophosphatase
L2_057_000M1_scaffold_462_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10029..12170
DNA (2142bp) protein (714aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6B357_9PORP
Peptidase S9A/B/C family catalytic domain protein {ECO:0000313|EMBL:CDD11991.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
peptidase s9b dipeptidylpeptidase IV domain-containing protein
L2_057_000M1_scaffold_462_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12242..13876)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6AQG1_9PORP
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EDN87296.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
sialidase
L2_057_000M1_scaffold_462_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13883..14857)
DNA (975bp) protein (325aa)
Arylsulfatase n=2 Tax=Parabacteroides merdae RepID=A7AE03_9PORP
Arylsulfatase {ECO:0000313|EMBL:EDN87295.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
iduronate-2-sulfatase
L2_057_000M1_scaffold_462_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14877..15320)
DNA (444bp) protein (148aa)
Arylsulfatase n=2 Tax=Parabacteroides merdae RepID=A7AE03_9PORP
Arylsulfatase {ECO:0000313|EMBL:EDN87295.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
iduronate-2-sulfatase
L2_057_000M1_scaffold_462_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15373..16500)
DNA (1128bp) protein (376aa)
nanH; sialidase (EC:3.2.1.18)
BNR/Asp-box repeat protein n=2 Tax=Parabacteroides merdae RepID=A7AE02_9PORP
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EDN87294.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_057_000M1_scaffold_462_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16522..17460)
DNA (939bp) protein (313aa)
Dihydrodipicolinate synthetase family n=2 Tax=Parabacteroides merdae RepID=A7AE01_9PORP
Dihydrodipicolinate synthetase family {ECO:0000313|EMBL:EDN87293.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
dihydrodipicolinate synthetase
L2_057_000M1_scaffold_462_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17470..18924)
DNA (1455bp) protein (485aa)
SusD family protein n=2 Tax=Parabacteroides merdae RepID=A7AE00_9PORP
SusD family protein {ECO:0000313|EMBL:EDN87292.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RagB/SusD domain-containing protein
L2_057_000M1_scaffold_462_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18961..22125)
DNA (3165bp) protein (1055aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides merdae RepID=A7ADZ9_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDN87291.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TonB-dependent receptor plug
L2_057_000M1_scaffold_462_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22210..23121)
DNA (912bp) protein (304aa)
N-acetylneuraminate lyase n=2 Tax=Parabacteroides merdae RepID=K6BPZ1_9PORP
Putative N-acetylneuraminate lyase {ECO:0000313|EMBL:EDN87290.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative N-acetylneuraminate lyase (sialic acid lyase)
L2_057_000M1_scaffold_462_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23126..25717)
DNA (2592bp) protein (864aa)
Cyclically-permuted mutarotase family protein n=2 Tax=Parabacteroides merdae RepID=A7ADZ7_9PORP
Cyclically-permuted mutarotase family protein {ECO:0000313|EMBL:EDN87289.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
SSS sodium solute transporter superfamily protein
L2_057_000M1_scaffold_462_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25738..26007)
DNA (270bp) protein (90aa)
Transcriptional regulator, GntR family n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7ADZ6_9PORP
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDN87288.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative transcriptional regulator
Displaying 19 items

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