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L2_057_000M1_scaffold_527

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_527_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..1944
DNA (1944bp) protein (648aa)
Alpha-L-rhamnosidase N-terminal domain protein n=2 Tax=Parabacteroides merdae RepID=A7AER8_9PORP
Alpha-L-rhamnosidase N-terminal domain protein {ECO:0000313|EMBL:EDN86544.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L2_057_000M1_scaffold_527_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1956..4172
DNA (2217bp) protein (739aa)
Alpha-L-rhamnosidase N-terminal domain protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AER7_9PORP
Alpha-L-rhamnosidase N-terminal domain protein {ECO:0000313|EMBL:EDN86543.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L2_057_000M1_scaffold_527_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4348..5667)
DNA (1320bp) protein (440aa)
TonB-dependent receptor n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AER6_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EDN86542.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TonB
L2_057_000M1_scaffold_527_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5688..6047)
DNA (360bp) protein (120aa)
Transcriptional regulator, BlaI/MecI/CopY family n=7 Tax=Parabacteroides RepID=B7BB35_9PORP
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EDN86541.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcriptional regulator
L2_057_000M1_scaffold_527_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6336..7475
DNA (1140bp) protein (380aa)
Carboxynorspermidine decarboxylase n=2 Tax=Parabacteroides merdae RepID=K6BHL9_9PORP
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:CDD13067.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
carboxynorspermidine decarboxylase
L2_057_000M1_scaffold_527_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7625..8578
DNA (954bp) protein (318aa)
Signal recognition particle receptor FtsY n=3 Tax=Parabacteroides RepID=A7AER2_9PORP
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
recognition particle-docking protein FtsY
L2_057_000M1_scaffold_527_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8599..9894
DNA (1296bp) protein (432aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Ribosomal protein S12 methylthiotransferase RimO n=2 Tax=Parabacteroides merdae RepID=A7AER1_9PORP
Fe-S oxidoreductase
L2_057_000M1_scaffold_527_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9978..10268
DNA (291bp) protein (97aa)
DNA-binding protein HU n=6 Tax=Parabacteroides RepID=A7AER0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07678.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
DNA-binding protein HU
L2_057_000M1_scaffold_527_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10261..11415
DNA (1155bp) protein (385aa)
DNA-binding protein HU n=2 Tax=Parabacteroides merdae RepID=A7AEQ9_9PORP
DNA-binding protein HU {ECO:0000313|EMBL:EDN86535.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
integration host factor IHF subunit alpha
L2_057_000M1_scaffold_527_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11574..12569
DNA (996bp) protein (332aa)
ATPase family associated with various cellular activities (AAA) n=4 Tax=Parabacteroides RepID=A7AEQ8_9PORP
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EDN86534.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
magnesium chelatase subunit I
L2_057_000M1_scaffold_527_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12675..13544
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AEQ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86533.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_527_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13554..14570
DNA (1017bp) protein (339aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AEQ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86532.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_527_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14572..15558
DNA (987bp) protein (329aa)
von Willebrand factor type A domain protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AEQ5_9PORP
von Willebrand factor type A domain protein {ECO:0000313|EMBL:EDN86531.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_527_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15572..16591
DNA (1020bp) protein (340aa)
von Willebrand factor type A domain protein n=3 Tax=Parabacteroides RepID=A7AEQ4_9PORP
von Willebrand factor type A domain protein {ECO:0000313|EMBL:EDN86530.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_527_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16607..17359
DNA (753bp) protein (251aa)
Tetratricopeptide repeat protein n=3 Tax=Parabacteroides merdae RepID=A7AEQ3_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDN86529.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_527_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17409..19223
DNA (1815bp) protein (605aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AEQ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15926.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L2_057_000M1_scaffold_527_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19228..19995
DNA (768bp) protein (256aa)
Tetratricopeptide repeat protein n=2 Tax=Parabacteroides merdae RepID=A7AEQ1_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDN86527.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_527_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20071..20763
DNA (693bp) protein (231aa)
PAP2 family protein n=2 Tax=Parabacteroides merdae RepID=A7AEQ0_9PORP
PAP2 family protein {ECO:0000313|EMBL:EDN86526.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
membrane-associated phospholipid phosphatase
L2_057_000M1_scaffold_527_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20837..21154
DNA (318bp) protein (106aa)
Uncharacterized protein n=6 Tax=Parabacteroides RepID=A7AEP9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13035.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_057_000M1_scaffold_527_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21268..22383
DNA (1116bp) protein (372aa)
Universal stress family protein n=3 Tax=Parabacteroides RepID=A7AEP8_9PORP
Universal stress family protein {ECO:0000313|EMBL:EDN86524.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
universal stress protein UspA
L2_057_000M1_scaffold_527_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22287..22511)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZWS9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15931.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L2_057_000M1_scaffold_527_22
unknown

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comp(22631..22756)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 22 items

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