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L2_057_000M1_scaffold_533

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_533_1
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..133)
DNA (132bp) protein (44aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=5 Tax=Clostridiales RepID=A5KR39_9FIRM
L2_057_000M1_scaffold_533_2
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(203..1759)
DNA (1557bp) protein (519aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XFL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19905.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
LysM domain.
L2_057_000M1_scaffold_533_3
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1771..2232)
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=A5KR37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83203.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L2_057_000M1_scaffold_533_4
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2390..3127
DNA (738bp) protein (246aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=3 Tax=Clostridiales RepID=E5XFL2_9FIRM
L2_057_000M1_scaffold_533_5
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3252..4166)
DNA (915bp) protein (305aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=5 Tax=Clostridiales RepID=A5KQW2_9FIRM
L2_057_000M1_scaffold_533_6
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4287..5081)
DNA (795bp) protein (265aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=5 Tax=Clostridiales RepID=A5KQW1_9FIRM
L2_057_000M1_scaffold_533_7
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5189..5461)
DNA (273bp) protein (91aa)
Acylphosphatases (EC:3.6.1.7)
Acylphosphatase n=5 Tax=Clostridiales RepID=A5KQW0_9FIRM
Acylphosphatase {ECO:0000313|EMBL:CCZ26587.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L2_057_000M1_scaffold_533_8
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5924..6172
DNA (249bp) protein (83aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QDF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26588.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
iron-only hydrogenase system regulator
L2_057_000M1_scaffold_533_9
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6312..7370
DNA (1059bp) protein (353aa)
iron-only hydrogenase maturation protein HydE (EC:2.8.1.6)
Iron-only hydrogenase maturation rSAM protein HydE n=4 Tax=Lachnospiraceae RepID=A5KQV8_9FIRM
Radical SAM protein {ECO:0000313|EMBL:EFV19898.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L2_057_000M1_scaffold_533_10
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7468..8889
DNA (1422bp) protein (474aa)
Iron-only hydrogenase maturation rSAM protein HydG n=5 Tax=Clostridiales RepID=A5KQV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26590.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
iron-only hydrogenase maturation protein HydG
L2_057_000M1_scaffold_533_11
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9033..10481
DNA (1449bp) protein (483aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=5 Tax=Clostridiales RepID=A5KQV6_9FIRM
L2_057_000M1_scaffold_533_12
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10631..11683
DNA (1053bp) protein (351aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=5 Tax=Clostridiales RepID=A5KQV5_9FIRM
L2_057_000M1_scaffold_533_13
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11717..13138
DNA (1422bp) protein (474aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=5 Tax=Clostridiales RepID=A5KQV4_9FIRM
L2_057_000M1_scaffold_533_14
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13172..13981
DNA (810bp) protein (270aa)
Cof-like hydrolase n=5 Tax=Clostridiales RepID=A5KQV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26594.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
HAD-superfamily hydrolase, subfamily IIB
L2_057_000M1_scaffold_533_15
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14039..14914)
DNA (876bp) protein (292aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
aroE2; shikimate dehydrogenase AroE (EC:1.1.1.25)
Shikimate dehydrogenase n=5 Tax=Clostridiales RepID=A5KQV2_9FIRM
L2_057_000M1_scaffold_533_16
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15169..16599
DNA (1431bp) protein (477aa)
Phospholipase D domain protein n=5 Tax=Clostridiales RepID=A5KQV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26596.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
L2_057_000M1_scaffold_533_17
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16713..17450)
DNA (738bp) protein (246aa)
DNA-binding helix-turn-helix protein n=5 Tax=Clostridiales RepID=A5KQU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26597.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
putative Xre family DNA-binding protein
L2_057_000M1_scaffold_533_18
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17661..18209
DNA (549bp) protein (183aa)
Sporulation initiation factor Spo0A domain protein n=5 Tax=Clostridiales RepID=A5KQU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26598.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
sporulation transcriptional activator Spo0A
L2_057_000M1_scaffold_533_19
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18369..19745
DNA (1377bp) protein (459aa)
MATE efflux family protein n=5 Tax=Clostridiales RepID=A5KQU7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFV19888.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
putative efflux protein, MATE family
L2_057_000M1_scaffold_533_20
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19901..21199)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QD43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26600.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
integral membrane sensor signal transduction histidine kinase
L2_057_000M1_scaffold_533_21
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21174..21893)
DNA (720bp) protein (240aa)
Response regulator receiver domain protein n=4 Tax=Lachnospiraceae RepID=A5KQU5_9FIRM
Regulatory protein VanR {ECO:0000313|EMBL:EFV19886.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_057_000M1_scaffold_533_22
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22188..22322)
DNA (135bp) protein (45aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_1_57FAA RepID=F7JBN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26602.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Predicted membrane protein
Displaying 22 items

View Taxonomy