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L2_057_000M1_scaffold_635

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_635_1
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..289
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61824.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
L2_057_000M1_scaffold_635_2
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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388..1032
DNA (645bp) protein (215aa)
Amino acid ABC transporter membrane protein PAAT family (TC 3.A.1.3.-) n=1 Tax=Clostridium sp. CAG:678 RepID=R5L3C3_9CLOT
Amino acid ABC transporter membrane protein PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CCY67502.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
L2_057_000M1_scaffold_635_3
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1045..1845
DNA (801bp) protein (267aa)
ABC transporter, ATP-binding protein n=2 Tax=Oscillibacter RepID=U2QN09_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK57574.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative amino acid ABC transporter, ATP-binding protein
L2_057_000M1_scaffold_635_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1925..2476)
DNA (552bp) protein (184aa)
Ribosomal subunit interface protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEV8_9FIRM
Ribosomal subunit interface protein {ECO:0000313|EMBL:EGJ45978.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative ribosome-associated protein
L2_057_000M1_scaffold_635_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2632..3798)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45979.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
amidohydrolase
L2_057_000M1_scaffold_635_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4022..4510)
DNA (489bp) protein (163aa)
S1 RNA binding domain-containing protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEW0_9FIRM
S1 RNA binding domain-containing protein {ECO:0000313|EMBL:EGJ45980.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
RNA binding S1 domain-containing protein
L2_057_000M1_scaffold_635_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4606..4881)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45981.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
septum formation initiator family protein
L2_057_000M1_scaffold_635_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5371..5661)
DNA (291bp) protein (97aa)
Sporulation protein YabP n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEW2_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:EGJ45982.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_057_000M1_scaffold_635_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5726..6775)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM97934.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
acyltransferase
L2_057_000M1_scaffold_635_10
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6775..7113)
DNA (339bp) protein (113aa)
Glyoxalase family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1P3_9FIRM
Glyoxalase family protein {ECO:0000313|EMBL:EDM97935.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
L2_057_000M1_scaffold_635_11
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7327..8658)
DNA (1332bp) protein (444aa)
TRAP transporter, DctM-like membrane protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N4F7_9CLOT
TRAP transporter, DctM-like membrane protein {ECO:0000313|EMBL:EJF39312.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
citrate transporter
L2_057_000M1_scaffold_635_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8715..10304)
DNA (1590bp) protein (530aa)
N-acyl-D-aspartate deacylase n=1 Tax=Clostridium sporosphaeroides RepID=UPI000381B2EF
D-aminoacylase, C-terminal domain protein {ECO:0000313|EMBL:EJF39303.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
d-aminoacylase
L2_057_000M1_scaffold_635_13
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10439..10786)
DNA (348bp) protein (116aa)
PF12986 structural domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H1G6_9CLOT
PF12986 structural domain protein {ECO:0000313|EMBL:EJF39280.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L2_057_000M1_scaffold_635_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11100..12044
DNA (945bp) protein (315aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L-lactate dehydrogenase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCX7_9FIRM
L-lactate dehydrogenase
L2_057_000M1_scaffold_635_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12136..12306)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47245.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_057_000M1_scaffold_635_16
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(12493..13581)
DNA (1089bp) protein (363aa)
Ribosome-binding ATPase YchF n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YG23_9FIRM
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
engD; GTP-dependent nucleic acid-binding protein EngD
L2_057_000M1_scaffold_635_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13800..14675)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46924.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Transcriptional regulator
L2_057_000M1_scaffold_635_18
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14793..15755)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M1P5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64758.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Transcriptional regulator
L2_057_000M1_scaffold_635_19
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15980..17395
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9MA69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64757.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Predicted membrane protein
L2_057_000M1_scaffold_635_20
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17465..18634
DNA (1170bp) protein (390aa)
Amidohydrolase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M263_9FIRM
Amidohydrolase {ECO:0000313|EMBL:EOS64756.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
amidohydrolase
L2_057_000M1_scaffold_635_21
Selenomonas sp. FOBRC9, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18806..18931
DNA (126bp) protein (42aa)
Citrate lyase acyl carrier protein n=1 Tax=Selenomonas sp. FOBRC9 RepID=J5HUU8_9FIRM
Citrate lyase acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_00805}; Citrate lyase gamma chain {ECO:0000256|HAMAP-Rule:MF_00805}; TaxID=936573 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. FOBRC9.;"
Citrate lyase acyl carrier protein
Displaying 21 items

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