ggKbase home page

L2_057_000M1_scaffold_658

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_658_1
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

234..674
DNA (441bp) protein (147aa)
Transposase and inactivated derivatives n=1 Tax=Blautia sp. CAG:237 RepID=R6LUL8_9FIRM
Transposase and inactivated derivatives {ECO:0000313|EMBL:CDB77722.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
Transposase and inactivated derivatives
L2_057_000M1_scaffold_658_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

738..1070
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77288.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_057_000M1_scaffold_658_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1365..1988
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZFA5_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR77177.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_057_000M1_scaffold_658_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1975..2889
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZFA4_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR77176.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L2_057_000M1_scaffold_658_5
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3412..5190
DNA (1779bp) protein (593aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G7Z0_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCY13288.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_057_000M1_scaffold_658_6
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5204..7474
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GKF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13287.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Signal transduction histidine kinase
L2_057_000M1_scaffold_658_7
unknown

Not on your lists

comp(7461..7679)
DNA (219bp) protein (73aa)

This feature has no annotations

L2_057_000M1_scaffold_658_8
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7797..8729
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Coprococcus catus GD/7 RepID=D4J4C8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK79199.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_057_000M1_scaffold_658_9
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8729..9496
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPE3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42678.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_057_000M1_scaffold_658_10
unknown

Not on your lists

9747..10286
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E55F2D
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
Uncharacterized protein {ECO:0000313|EMBL:CBL38627.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_057_000M1_scaffold_658_11
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10232..10699
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PJJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK50725.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L2_057_000M1_scaffold_658_12
unknown

Not on your lists

10937..11233
DNA (297bp) protein (99aa)

This feature has no annotations

L2_057_000M1_scaffold_658_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11255..11764
DNA (510bp) protein (170aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBZ2_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sigma-70 family RNA polymerase sigma factor
L2_057_000M1_scaffold_658_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11766..12419
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77694.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_057_000M1_scaffold_658_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12611..13465
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77284.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_057_000M1_scaffold_658_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13556..14869
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77283.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transporter, NhaC family (TC 2.A.35)
L2_057_000M1_scaffold_658_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15023..15664
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77691.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted transcriptional regulators
L2_057_000M1_scaffold_658_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15645..15956
DNA (312bp) protein (104aa)
UPF0145 protein RSAG_01454 n=2 Tax=Ruminococcus RepID=C6JBY7_9FIRM
UPF0145 protein RSAG_01454 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_057_000M1_scaffold_658_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16061..16489
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000316D685
Uncharacterized protein {ECO:0000313|EMBL:EES77280.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_057_000M1_scaffold_658_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16608..17975)
DNA (1368bp) protein (456aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBY5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EES77279.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative efflux protein, MATE family
Displaying 20 items

View Taxonomy