ggKbase home page

L2_057_000M1_scaffold_777

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_777_1
unknown

Not on your lists

comp(2..115)
DNA (114bp) protein (38aa)

This feature has no annotations

L2_057_000M1_scaffold_777_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

196..780
DNA (585bp) protein (195aa)
RNA polymerase ECF-type sigma factor n=3 Tax=Bacteroides vulgatus RepID=A6L1U0_BACV8
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ABR39654.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_057_000M1_scaffold_777_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

848..1999
DNA (1152bp) protein (384aa)
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Bacteroides vulgatus RepID=D4VCH9_BACVU
anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:ABR39653.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_057_000M1_scaffold_777_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2034..2714
DNA (681bp) protein (227aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=root RepID=R9H0E8_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOR97388.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L2_057_000M1_scaffold_777_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2668..5250
DNA (2583bp) protein (861aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=C6Z4X5_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EET15834.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L2_057_000M1_scaffold_777_6
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5271..6356
DNA (1086bp) protein (362aa)
Outer membrane protein n=5 Tax=Bacteroides RepID=E5UZL3_9BACE
hypothetical protein
Outer membrane protein {ECO:0000313|EMBL:EFV65451.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L2_057_000M1_scaffold_777_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6407..6661
DNA (255bp) protein (85aa)
Outer membrane protein n=5 Tax=Bacteroides RepID=E5UZL3_9BACE
starch-binding protein
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS29580.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_057_000M1_scaffold_777_8
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6680..7108
DNA (429bp) protein (143aa)
Thioredoxin n=3 Tax=Bacteroides RepID=C6Z4X8_9BACE
Thioredoxin {ECO:0000313|EMBL:EET15837.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
disulfide-isomerase
L2_057_000M1_scaffold_777_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7277..7687
DNA (411bp) protein (137aa)
Thioredoxin n=3 Tax=Bacteroides RepID=C6Z4X8_9BACE
disulfide-isomerase
Uncharacterized protein {ECO:0000313|EMBL:EIY81439.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_057_000M1_scaffold_777_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7689..9038
DNA (1350bp) protein (450aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=R9H042_BACVU
thiol-disulfide oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:EOR97391.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_057_000M1_scaffold_777_11
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9234..10469)
DNA (1236bp) protein (412aa)
Oxaloacetate decarboxylase beta chain n=7 Tax=Bacteroides RepID=A6L1T4_BACV8
oxaloacetate decarboxylase subunit beta
Oxaloacetate decarboxylase beta chain {ECO:0000313|EMBL:CDF17377.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_057_000M1_scaffold_777_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10469..12331)
DNA (1863bp) protein (621aa)
Biotin-requiring enzyme n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCH3_BACVU
Biotin-requiring enzyme {ECO:0000313|EMBL:EFG16486.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
pyruvate carboxylase subunit B
L2_057_000M1_scaffold_777_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12362..12613)
DNA (252bp) protein (84aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L1T2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY81443.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_057_000M1_scaffold_777_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12654..12788)
DNA (135bp) protein (45aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=G1UM59_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOR97396.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_057_000M1_scaffold_777_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12881..13381)
DNA (501bp) protein (167aa)
Nitroreductase family protein n=6 Tax=Bacteroides RepID=A6L1T1_BACV8
nitroreductase
Uncharacterized protein {ECO:0000313|EMBL:EOR97397.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_057_000M1_scaffold_777_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13444..14097
DNA (654bp) protein (218aa)
Phosphoglycolate phosphatase n=2 Tax=Bacteroides vulgatus RepID=A6L1T0_BACV8
phosphoglycolate phosphatase
HAD hydrolase, IA, variant 1 family protein {ECO:0000313|EMBL:KDS29588.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_057_000M1_scaffold_777_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14107..15087)
DNA (981bp) protein (327aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
6-phosphofructokinase n=9 Tax=Bacteroides RepID=A6L1S9_BACV8
6-phosphofructokinase
L2_057_000M1_scaffold_777_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15348..15788
DNA (441bp) protein (147aa)
DoxX protein n=2 Tax=Bacteroides vulgatus RepID=D4VCG8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOR97399.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
DoxX family protein
L2_057_000M1_scaffold_777_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15794..16789)
DNA (996bp) protein (332aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCG7_BACVU
ABC transporter ATP-binding protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFG16480.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L2_057_000M1_scaffold_777_20
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16811..17632)
DNA (822bp) protein (274aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6Z4Y7_9BACE
ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDF17369.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_057_000M1_scaffold_777_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17715..18641
DNA (927bp) protein (309aa)
Putative membrane protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCG5_BACVU
Putative membrane protein {ECO:0000313|EMBL:EFG16478.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
membrane protein
L2_057_000M1_scaffold_777_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18749..19609)
DNA (861bp) protein (287aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=8 Tax=root RepID=C6Z4Y9_9BACE
oxidoreductase
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KDS56510.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_057_000M1_scaffold_777_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19606..20832)
DNA (1227bp) protein (409aa)
Oxidoreductase, FAD/FMN-binding n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCG3_BACVU
Oxidoreductase, FAD/FMN-binding {ECO:0000313|EMBL:EFG16476.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
NADH:flavin oxidoreductase
L2_057_000M1_scaffold_777_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20892..21656)
DNA (765bp) protein (255aa)
3-oxo-5-alpha-steroid 4-dehydrogenase n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VCG2_BACVU
3-oxo-5-alpha-steroid 4-dehydrogenase {ECO:0000313|EMBL:EFG16475.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
3-oxo-5-alpha-steroid 4-dehydrogenase
L2_057_000M1_scaffold_777_25
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21780..21959)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Bacteroides dorei DSM 17855 RepID=B6W0N4_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB24402.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
Displaying 25 items

View Taxonomy