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L2_057_000M1_scaffold_819

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_819_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(88..852)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77489.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Glycosyltransferases involved in cell wall biogenesis
L2_057_000M1_scaffold_819_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(855..2255)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80524.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L2_057_000M1_scaffold_819_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2747..3886
DNA (1140bp) protein (380aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCJ7_9FIRM
L2_057_000M1_scaffold_819_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3888..5003
DNA (1116bp) protein (372aa)
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80160.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_057_000M1_scaffold_819_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5274..5870
DNA (597bp) protein (199aa)
50S ribosomal protein L25 n=2 Tax=Ruminococcus RepID=C6JCJ9_9FIRM
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LSU ribosomal protein L25P
L2_057_000M1_scaffold_819_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5991..7541)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80162.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
PucR family transcriptional regulator
L2_057_000M1_scaffold_819_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7649..8284)
DNA (636bp) protein (212aa)
Methylmalonyl-CoA mutase domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCK1_9FIRM
Methylmalonyl-CoA mutase domain-containing protein {ECO:0000313|EMBL:EES77495.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
methyltransferase cognate corrinoid protein
L2_057_000M1_scaffold_819_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8678..9214)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77497.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_057_000M1_scaffold_819_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9367..11100)
DNA (1734bp) protein (578aa)
Ferredoxin n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJE9_9FIRM
Ferredoxin {ECO:0000313|EMBL:CDD78161.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_057_000M1_scaffold_819_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11484..12119)
DNA (636bp) protein (212aa)
Methanosarcina family methyltransferase cognate corrinoid protein n=2 Tax=Ruminococcus RepID=C6JCK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75923.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted cobalamin binding protein
L2_057_000M1_scaffold_819_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12196..13014)
DNA (819bp) protein (273aa)
Methyl corrinoid protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDA1_9FIRM
Methyl corrinoid protein {ECO:0000313|EMBL:CDD75920.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Pterin binding enzyme.
L2_057_000M1_scaffold_819_12
unknown

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comp(12998..13135)
DNA (138bp) protein (46aa)

This feature has no annotations

L2_057_000M1_scaffold_819_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13117..14151)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77501.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
uroporphyrinogen-III decarboxylase
L2_057_000M1_scaffold_819_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14579..15505
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CD97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75915.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_057_000M1_scaffold_819_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15552..16520
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CDW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75912.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_057_000M1_scaffold_819_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16597..17043
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77504.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_057_000M1_scaffold_819_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17209..18339)
DNA (1131bp) protein (377aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Malate/L-lactate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CD92_9FIRM
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:CDD75910.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_057_000M1_scaffold_819_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18742..19590
DNA (849bp) protein (283aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77506.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_057_000M1_scaffold_819_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19740..20894)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77507.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L2_057_000M1_scaffold_819_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21017..21484)
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77508.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_057_000M1_scaffold_819_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21670..22137)
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77509.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_057_000M1_scaffold_819_22
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22245..22421)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZU35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM86862.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Displaying 22 items

View Taxonomy