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L2_057_000M1_scaffold_909

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_909_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3..929
DNA (927bp) protein (309aa)
GDSL-like protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA37_9FIRM
GDSL-like protein {ECO:0000313|EMBL:EEC90394.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
lipolytic protein G-D-S-L family
L2_057_000M1_scaffold_909_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1066..1953
DNA (888bp) protein (296aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA36_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EEC90393.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted dehydrogenases and related proteins
L2_057_000M1_scaffold_909_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1950..2744
DNA (795bp) protein (265aa)
Glycosyl hydrolase family 25 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA35_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EEC90392.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L2_057_000M1_scaffold_909_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2905..3159
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90391.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L2_057_000M1_scaffold_909_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3153..4028
DNA (876bp) protein (292aa)
Proline iminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; Short=PIP {ECO:0000256|PIRNR:PIRNR005539};; EC=3.4.11.5 {ECO:0000256|PIRNR:PIRNR005539};; Prolyl aminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Proline iminopeptidase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA33_9FIRM
pepI; proline iminopeptidase
L2_057_000M1_scaffold_909_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


4362..4673
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA32_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
SSU ribosomal protein S10P
L2_057_000M1_scaffold_909_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


4688..5380
DNA (693bp) protein (231aa)
50S ribosomal protein L3 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA31_9FIRM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L3P
L2_057_000M1_scaffold_909_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


5380..6009
DNA (630bp) protein (210aa)
50S ribosomal protein L4 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA30_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L4P
L2_057_000M1_scaffold_909_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


6009..6302
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA29_9FIRM
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L23P
L2_057_000M1_scaffold_909_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


6361..7194
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA28_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L2P
L2_057_000M1_scaffold_909_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


7213..7488
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA27_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
SSU ribosomal protein S19P
L2_057_000M1_scaffold_909_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


7503..7838
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA26_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L22P
L2_057_000M1_scaffold_909_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


7849..8661
DNA (813bp) protein (271aa)
30S ribosomal protein S3 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA25_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
SSU ribosomal protein S3P
L2_057_000M1_scaffold_909_14
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


8661..9077
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA24_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L16P
L2_057_000M1_scaffold_909_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


9077..9277
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA23_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L29P
L2_057_000M1_scaffold_909_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


9291..9548
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA22_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
SSU ribosomal protein S17P
L2_057_000M1_scaffold_909_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


9567..9935
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA21_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L14P
L2_057_000M1_scaffold_909_18
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


9949..10269
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA20_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
rplX; 50S ribosomal protein L24
L2_057_000M1_scaffold_909_19
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


10281..10820
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA19_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L5P
L2_057_000M1_scaffold_909_20
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


10834..11019
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA18_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
SSU ribosomal protein S14P
L2_057_000M1_scaffold_909_21
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


11035..11430
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA17_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
SSU ribosomal protein S8P
L2_057_000M1_scaffold_909_22
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


11456..12001
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA16_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L6P
L2_057_000M1_scaffold_909_23
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


12023..12379
DNA (357bp) protein (119aa)
50S ribosomal protein L18 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA15_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
LSU ribosomal protein L18P
L2_057_000M1_scaffold_909_24
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


12391..12681
DNA (291bp) protein (97aa)
30S ribosomal protein S5 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA14_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
SSU ribosomal protein S5P
Displaying 24 items

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