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L2_057_000M1_scaffold_630_4

Organism: L2_057_000M1_public_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 15
Location: comp(6555..10058)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 1167.0
  • Bit_score: 2298
  • Evalue 0.0
Transcription-repair-coupling factor n=2 Tax=Parabacteroides merdae RepID=A7AEJ3_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 1167.0
  • Bit_score: 2298
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 1116.0
  • Bit_score: 1976
  • Evalue 0.0

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Taxonomy

Parabacteroides merdae → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3504
TTGAGAATTGAAAATGAGAAGATCCTGCTCATTTCAATTGACAACCCAAGCGCGAAGGTAGATATTTTCATTGGTTTTAGGAAGATTATTGTAACATTTTCCGTAATTTTGCGCATATATAATTATCAATTTTCAATTCATCCGTTGGAGGTACAAGATTTACTAAAACAATATGCCGCCCATCCGCAAGTGGCGGCATTAAATACCCTGTTAAAAAACAAAACGTCCCGCAATATATTTCTGAAAGGACTGAACGGTTCAGGGGCCGCAATGACAATAGCTTCTCTTTTTTCAAAAAGAAGAGGAAGTTATGTGTGTGTGTTGAATGACCTAGAGGATGCCGGCTACTTTTATCACGATCTGGTGCAACTCACAGGAGGTGACGGAATCTATTTCTTTCCTTCTGCTTACCGACGTGCTATCAAGTACGGACATGTGGATCCAGCCAACGAAATCCTGCGGACAGAAGTTCTCAGCACGCTGCAGGATCCGACTGCTCCCTTCATCATTGTCACCTATCCGGAAGCATTGGCGGAGAAAGTAATTTCACGGGAGGTCTTGAAAGAAAACACGCTGAAGATCAGTGTCGGCGAAAGGTTGGACAATATGTTTGTTTCTGACGTACTGGACGAATACGGCTTCGAGCAGGTAGATTATGTTTATGAACCAGGGCAGTATGCAATGCGCGGCAGTATCTTAGATGTGTTCTCGTTCTCGTATGAATTTCCCTATCGTATCGACTTCTTTGGAAACGAGGTAGAGACGATCCGTTCGTTCGATGTGGAAACACAGCTATCCAAAGAAAAACTGGACAGCATCTATATCGTGCCCGAAATGACAAAAGGAAACCGGACCAACTCATCCTTACTAGATTCATTGCCATCCGAGACACTGCTCGCTAGCAAAGACATGGCATGGGTAAAAGAACGTATCGGCAGTATCTGGAATGAAGAACCAATCATCGGGGACGAAGAATCGTTTGCCAACATCGAGCAACTGCGGGCCAAATTAATTACCGGAGAGGATTTTCTACATGCGGCACTTGGTTTCTGCCGGCTCCATTTTGGTACGCGGCCTATGGAAGTAGCCGATGCCACCCTGACTTTCTCAATGGAAGCACAACCGATTTATCATAAAAATTTCGATTTGGTAAGCGAGTCTTTCCATAAATATTTAGAAGACGGCTATACATTATATATACTGAGCGATGTAGAAAAGCAAGCAACCCGTATCAGGGCCATTTTTGAGGATCGGGGAGACGACATACCTTTTACCTCCGTCAACAAGACCATTCATGAAGGTTTTGCCGATGAGACCTTGCGTGTCTGCCTTTTCACGGATCACCAGTTGTTCGACCGCTTTCATAAATTCAACTTGAAAAGCGATAAAGCAAGAAGTGGAAAACTCTCTCTGTCGTTGAAGGAGTTGAACCAATTCACGACCGGCGATTATATCGTACATATCGATCATGGTGTCAGACAATTCGGCGGGCTAGTCCGTACGGAAGTAAACGGAAAAATGCAGGAAGCCATCAGGCTGATCTACCAGAACAACGACATTATATTCGTCAGCATTCACTCTCTCCATAAGCTATCCAAGTATAAAGGCAAGGACAGTGGGGAACCGCCCAAGCTGAGTAAACTCGGAACAGGGGCCTGGGAGAAGATGAAAGAACGCACCAAGTCAAAAGTAAAAGATATCGCCCGCGATTTGATTCTCCTCTACTCCAAACGAAAACAGGAAAAAGGTTTCGCTTACAGCCCAGACAGTTTCATGCAGCACGAACTGGAAGCCAGCTTTATCTACGAAGATACCCCTGACCAAATGAAAGCAACAGCCGATGTCAAAGCCGATATGGAGAACGACCGTCCGATGGACCGACTGATTTGCGGAGATGTAGGCTTCGGGAAAACGGAGGTAGCCATTCGTGCCGCTTTCAAAGCCGTTTCGGACAACAAGCAAGTTGCCGTGCTGGTCCCGACTACAGTATTAGCATTCCAGCACTATCAAACATTTTCCGAACGGTTGAAAGATTTTCCCTGCCGAATCGAATATATCAGCCGGGCACGTACGGCGAAAGAGATAAGGGAAACTTTGAAAGACTTGAAAGAAGGAAATATCAACATTATCATCGGCACCCATCGAATCGTCGGAAAAGATGTCACATTCAAAGATCTCGGTCTGCTGATTATCGACGAGGAACAGAAATTCGGCGTATCCGTCAAAGAGAAGCTACGCCAGCTGAAAGCCAACGTCGACACGCTCACCATGACCGCCACTCCGATTCCTCGTACCCTGCAATTCTCGTTGATGGGAGCCCGTGACTTGTCGAGCATCACGACTCCCCCACCCAACCGCTATCCGGTTCAAACAGAGGTAGAACGTTTTAACCCGGACATCATCCGAGAAGCCATCAATTTCGAGATGAGCCGTAACGGACAGGTTTTTTTCATCAACAATCGCATCCAAAATATTTATGAAATGGAAGCGCTTGTCAAACGTGAAGTGCCGGATGCCCGTATCGCTGTCGGTCACGGGCAGATGGAACCGGAGAAGCTGGAAAAGATCATTCTGGATTTCGTCAATTACGAATACGATGTACTGATCGCCACGAGCATTGTGGAGAGTGGCATCGACGTACCGAATGCAAATACGATCATCATCAATAATGCACAACAGTTCGGATTGTCCGATCTGCATCAACTACGCGGTCGTGTCGGGCGAAGTAACCGGAAAGCCTTCTGTTATCTCCTCTCTCCACCCTTGTCAAGTCTTACGCAGGAAGCACGCCGCCGTCTGCAGGCGATCGAGAATTTTTCAGAGTTGGGAAGCGGCATCCATATCGCCATGCAGGACCTTGACATCCGGGGTGCCGGTAATATGTTAGGTGCCGAACAAAGCGGTTTCATCGCCGACTTGGGCTACGAAACGTACCAGAAAATCCTGGAAGAAGCCGTTGACGAACTGAAAGCGGAAGAATTTGCCGACCTGTATTCCAACGCTACCGAAAATCGCCCCGACACCGGTAGCGAATATGTCCGTGAAACCTATATCGAAAGCGATTTGGAACTGATGTTCCCTCCGACCTACATCCCGAATGACTCCGAACGTGTCTCCCTCTATCGTGAACTGGACAAGATGGAGGAAGAGCGTGATATACTTGCTTTTACCGAGCGTCTGAAAGACCGTTTCGGAAAAGTGCCGAAAGAAGGGAAAGAACTGATCCGTGTCGTTCGCCTTCGCCGTATGGCAAAGACGTTAGGTATGGAAAAAGTAATTCTGAAAAAAGGACAGATGAGCATTTTTCTCGTCACTAATCCCGAAAGTCCTTACTACGAAAGCGAGGCCTTCGACAAGCTGCTCGGCTTCATCCAAAAGCATCCACGCGAATGCACGCTTCGCGAACAGAACGGAAAACGCAGTATCGTGATCAAGAATGTACCAACGGTAGAGGTGGCTTGTAATTACCTGGATGAAATCGGGAAAGTACAAATACAAAAATAA
PROTEIN sequence
Length: 1168
LRIENEKILLISIDNPSAKVDIFIGFRKIIVTFSVILRIYNYQFSIHPLEVQDLLKQYAAHPQVAALNTLLKNKTSRNIFLKGLNGSGAAMTIASLFSKRRGSYVCVLNDLEDAGYFYHDLVQLTGGDGIYFFPSAYRRAIKYGHVDPANEILRTEVLSTLQDPTAPFIIVTYPEALAEKVISREVLKENTLKISVGERLDNMFVSDVLDEYGFEQVDYVYEPGQYAMRGSILDVFSFSYEFPYRIDFFGNEVETIRSFDVETQLSKEKLDSIYIVPEMTKGNRTNSSLLDSLPSETLLASKDMAWVKERIGSIWNEEPIIGDEESFANIEQLRAKLITGEDFLHAALGFCRLHFGTRPMEVADATLTFSMEAQPIYHKNFDLVSESFHKYLEDGYTLYILSDVEKQATRIRAIFEDRGDDIPFTSVNKTIHEGFADETLRVCLFTDHQLFDRFHKFNLKSDKARSGKLSLSLKELNQFTTGDYIVHIDHGVRQFGGLVRTEVNGKMQEAIRLIYQNNDIIFVSIHSLHKLSKYKGKDSGEPPKLSKLGTGAWEKMKERTKSKVKDIARDLILLYSKRKQEKGFAYSPDSFMQHELEASFIYEDTPDQMKATADVKADMENDRPMDRLICGDVGFGKTEVAIRAAFKAVSDNKQVAVLVPTTVLAFQHYQTFSERLKDFPCRIEYISRARTAKEIRETLKDLKEGNINIIIGTHRIVGKDVTFKDLGLLIIDEEQKFGVSVKEKLRQLKANVDTLTMTATPIPRTLQFSLMGARDLSSITTPPPNRYPVQTEVERFNPDIIREAINFEMSRNGQVFFINNRIQNIYEMEALVKREVPDARIAVGHGQMEPEKLEKIILDFVNYEYDVLIATSIVESGIDVPNANTIIINNAQQFGLSDLHQLRGRVGRSNRKAFCYLLSPPLSSLTQEARRRLQAIENFSELGSGIHIAMQDLDIRGAGNMLGAEQSGFIADLGYETYQKILEEAVDELKAEEFADLYSNATENRPDTGSEYVRETYIESDLELMFPPTYIPNDSERVSLYRELDKMEEERDILAFTERLKDRFGKVPKEGKELIRVVRLRRMAKTLGMEKVILKKGQMSIFLVTNPESPYYESEAFDKLLGFIQKHPRECTLREQNGKRSIVIKNVPTVEVACNYLDEIGKVQIQK*