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L2_057_000M1_scaffold_630

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_057_000M1_scaffold_630_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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416..2791
DNA (2376bp) protein (792aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AEJ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86473.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_057_000M1_scaffold_630_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3036..4559
DNA (1524bp) protein (508aa)
Replicative DNA helicase n=3 Tax=Parabacteroides RepID=A7AEJ5_9PORP
Replicative DNA helicase {ECO:0000313|EMBL:EDN86471.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
DNA helicase
L2_057_000M1_scaffold_630_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4642..6549)
DNA (1908bp) protein (636aa)
AMP-binding enzyme n=4 Tax=Parabacteroides RepID=A7AEJ4_9PORP
AMP-binding enzyme {ECO:0000313|EMBL:EDN86470.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
long-chain-fatty-acid-CoA ligase
L2_057_000M1_scaffold_630_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6555..10058)
DNA (3504bp) protein (1168aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Transcription-repair-coupling factor n=2 Tax=Parabacteroides merdae RepID=A7AEJ3_9PORP
transcription-repair coupling factor
L2_057_000M1_scaffold_630_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10087..10845
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BHR7_9PORP
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDN86468.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycosyltransferase family dolichyl-phosphate beta-D-mannosyltransferase
L2_057_000M1_scaffold_630_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11748..12866)
DNA (1119bp) protein (373aa)
Response regulator receiver domain protein n=4 Tax=Parabacteroides RepID=A7AEI7_9PORP
Response regulator receiver domain protein {ECO:0000313|EMBL:EDN86463.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
two-component hybrid sensor kinase/response regulator
L2_057_000M1_scaffold_630_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13067..15517
DNA (2451bp) protein (817aa)
Carbohydrate binding domain protein n=3 Tax=Parabacteroides RepID=A7AEI5_9PORP
Carbohydrate binding domain protein {ECO:0000313|EMBL:EDN86461.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L2_057_000M1_scaffold_630_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15663..18011)
DNA (2349bp) protein (783aa)
Putative phage head-tail adaptor n=2 Tax=Parabacteroides RepID=A7AEI3_9PORP
Putative phage head-tail adaptor {ECO:0000313|EMBL:EDN86459.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
beta-N-acetylhexosaminidase
L2_057_000M1_scaffold_630_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18128..19408)
DNA (1281bp) protein (427aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=2 Tax=Parabacteroides merdae RepID=A7AEI1_9PORP
L2_057_000M1_scaffold_630_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19517..20572)
DNA (1056bp) protein (352aa)
Oxidoreductase, NAD-binding domain protein n=3 Tax=Parabacteroides RepID=A7AEI0_9PORP
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EDN86456.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative oxidoreductase
L2_057_000M1_scaffold_630_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20656..20808
DNA (153bp) protein (51aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AEH9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13569.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_057_000M1_scaffold_630_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21154..21324
DNA (171bp) protein (57aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=R6WW87_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13570.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_057_000M1_scaffold_630_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21633..23948)
DNA (2316bp) protein (772aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6BG80_9PORP
Phospholipase, patatin family {ECO:0000313|EMBL:EDN86453.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
patatin-like phospholipase
L2_057_000M1_scaffold_630_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24178..26229)
DNA (2052bp) protein (684aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Parabacteroides merdae RepID=A7AEH6_9PORP
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDN86452.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
heat shock protein 90
L2_057_000M1_scaffold_630_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26549..28105)
DNA (1557bp) protein (519aa)
Transporter, SSS family n=3 Tax=Parabacteroides RepID=A7AEH5_9PORP
Transporter, SSS family {ECO:0000313|EMBL:EDN86451.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
osmo-regulated proline transporter
L2_057_000M1_scaffold_630_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28102..28242)
DNA (141bp) protein (47aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AEH4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86450.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_057_000M1_scaffold_630_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28256..28681)
DNA (426bp) protein (142aa)
ACT domain protein n=2 Tax=Parabacteroides merdae RepID=A7AEH3_9PORP
ACT domain protein {ECO:0000313|EMBL:EDN86449.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acetohydroxyacid synthase small subunit
L2_057_000M1_scaffold_630_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28716..30017)
DNA (1302bp) protein (434aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Phenylacetate-coenzyme A ligase n=3 Tax=Parabacteroides RepID=A7AEH2_9PORP
phenylacetate-coenzyme A ligase
L2_057_000M1_scaffold_630_19
unknown

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30047..30157
DNA (111bp) protein (37aa)

This feature has no annotations

L2_057_000M1_scaffold_630_20
unknown

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comp(30415..30522)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 20 items

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